BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3319.p
         (212 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980223|ref|YP_001354570.1| carbonic anhydrase [Janthinobac...    81   4e-17
gi|152980256|ref|YP_001354286.1| carbonic anhydrase [Janthinobac...    75   2e-15

>gi|152980223|ref|YP_001354570.1| carbonic anhydrase
           [Janthinobacterium sp. Marseille]
          Length = 222

 Score = 81.3 bits (199), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 15/173 (8%)

Query: 21  ELFKSLANGQTPTALFISCSDSRMVPELVTQREPGDLFVIRNAGNIVPSFGPEPGGVSAS 80
           E F  LA  Q+P  L+I CSDSR+    +   +PG+LFV RN  N+V         V   
Sbjct: 27  EFFAKLAAQQSPEYLWIGCSDSRVPANEIVDLQPGELFVHRNIANVVAHSDLNCLSV--- 83

Query: 81  VEYAVAQLKVSDIVICGHSDCGAMTAVATCACLDHMPAVRNWLHHTDA-----ARMINES 135
           +++A+  L+V  +++CGH  C  + A  T      +    NWL H         R + ++
Sbjct: 84  LQFAIDVLRVKHVIVCGHYGCSGVHAAMTGR---RVGLADNWLRHVQDVHQKHGRYLGDA 140

Query: 136 RHHETEKDRIDGMVRENVIAQLNNIRTHPSVAVALAQGR-LALHGWVYDIESG 187
              + + DR+  +   NVI Q+ N+     V  A   G+ L +HGWVY ++ G
Sbjct: 141 LPTQAQHDRLCEL---NVIEQVANVCRTTIVQDAWENGQELTVHGWVYGLKDG 190


>gi|152980256|ref|YP_001354286.1| carbonic anhydrase
           [Janthinobacterium sp. Marseille]
          Length = 211

 Score = 75.5 bits (184), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 81/169 (47%), Gaps = 11/169 (6%)

Query: 26  LANGQTPTALFISCSDSRMVPELVTQREPGDLFVIRNAGNIVPSFGPEPGGVSASVEYAV 85
           +A GQ P A+ + CSDSR+  ELV  +  GDLFVIR AGNIV      P  V  SVE+A 
Sbjct: 37  IAAGQEPFAIILGCSDSRVPAELVFDQGLGDLFVIRVAGNIVA-----PSQV-GSVEFAA 90

Query: 86  AQLKVSDIVICGHSDCGAMTAVATCACLDHMPAVRNWLHHTDAARMINESRHHETEKDRI 145
            + +   +V+ GHS CGA+ A             RN     D  R   E+      K   
Sbjct: 91  DRYRTKLVVVLGHSQCGAILATLDELKRPSENQSRNLKSIVDRIRPSIETLMETELKHDH 150

Query: 146 DGM----VRENVIAQLNNIRTHPSVAVALAQGR-LALHGWVYDIESGSI 189
           D +    VR N+ A +N++R    +   L Q   L + G  Y +E+G +
Sbjct: 151 DALVHQSVRANIRASVNHLRHGSEILENLIQNEGLLVVGAEYSLETGEV 199


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 497,273
Number of extensions: 18539
Number of successful extensions: 57
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 2
Length of query: 212
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 133
Effective length of database: 928,958
Effective search space: 123551414
Effective search space used: 123551414
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)