BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3318.p (343 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [... 169 2e-43 gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [... 169 3e-43 gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxid... 132 3e-32 gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxid... 112 2e-26 >gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [Janthinobacterium sp. Marseille] Length = 337 Score = 169 bits (428), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 122/330 (36%), Positives = 163/330 (49%), Gaps = 14/330 (4%) Query: 20 LGSNGPLVSAIGLGCMGMSDFYARRDDAESLATIDRALELGINLLDTADMYGPYTNEELL 79 LG +G VS + C+G F D+ S I A E GIN +DTAD+Y +E ++ Sbjct: 6 LGKSGLKVSRL---CLGTMMFGGASDEQTSHQIIQHAHEHGINFIDTADIYTGGESERVV 62 Query: 80 GRAIQGRRDKFFIATKFGIRRDPADPQARGVDGSPAYIRQAVEGSLRRLGVDTIDLYYQH 139 G+ I +RDK+ +ATK G D P +G+ S I QAVE SL+RLG D ID+YY H Sbjct: 63 GKGIAAQRDKWVLATKVGNGSDKW-PNEKGL--SRRRIIQAVEQSLQRLGTDYIDIYYLH 119 Query: 140 RIDPATPIEATMGVLADLVRAGKIRYIGLSEASAATL-ERAHR-----VHPVTALQSEYS 193 R DPATP+ T+ L DL+ GKIRY GLS SA L E H V P Q Y+ Sbjct: 120 RPDPATPLHETVRALGDLIAQGKIRYFGLSNFSAWQLAEVVHLSKELGVAPPIVSQPYYN 179 Query: 194 LWTRDPEAEVLATCRALGIGFVAYSPLGRGFLTGA-IQRFEDLAEDDFRRTNPR-FQGEN 251 R PE E L C G+G V+YSPL RG LTG + E R + R Q E Sbjct: 180 AANRMPEVEHLPACHFHGLGVVSYSPLARGVLTGKYLPGNEPDQNSRVGRGDKRALQTEW 239 Query: 252 FARNLRLVDKVKEMAEHHGCTPSQLALAWVMAQDPHIVPIPGTKRRRYLEENAGAFNVKL 311 ++ L ++E A+ HG T +LALAWV+ I G + + N Sbjct: 240 RPESIALAQALQEHAQVHGTTNIELALAWVLNNRLVTSVIGGPRTFEQWQAYLNGLNYHF 299 Query: 312 SSEDLLALEAIFPRGVAAGARYTEASMKML 341 + ED + + P G + YT+ ++ Sbjct: 300 TPEDEALFDRLVPPGHPSTPGYTDPEYPVI 329 >gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [Janthinobacterium sp. Marseille] Length = 337 Score = 169 bits (427), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 118/328 (35%), Positives = 171/328 (52%), Gaps = 20/328 (6%) Query: 18 RRLGSNGPLVSAIGLGCMGMSDFYARRDDAESLATIDRALELGINLLDTADMYGPYTNEE 77 R G G +S + LGCM F + + +++ IDRA++ GIN++DTA++Y +EE Sbjct: 7 RNFGRTGVKISPLTLGCMM---FGNKTELDDTVRIIDRAIDAGINIIDTANVYARGRSEE 63 Query: 78 LLGRAIQ--GRRDKFFIATKFGIRRDPADPQARGVDGSPAYIRQAVEGSLRRLGVDTIDL 135 G A++ G+R F+A+K + D RG S +I Q VE SLRRL D +DL Sbjct: 64 FTGEALKRNGKRKDIFLASKVHLPMHDTDGNLRG--SSRRHIIQQVEDSLRRLQTDYLDL 121 Query: 136 YYQHRIDPATPIEATMGVLADLVRAGKIRYIG--------LSEASAATLERAHRVHPVTA 187 Y HR +P T I+ T+ L DLV++GK+RYIG + EA A+ E ++ + Sbjct: 122 YQIHRPEPTTAIDETLRALDDLVKSGKVRYIGSTTFAGWQVVEALWASKELG--LNRFVS 179 Query: 188 LQSEYSLWTRDPEAEVLATCRALGIGFVAYSPLGRGFLTGAIQRFEDLAEDDFRRTNPR- 246 Q Y+L R E E+L G+ + +SP+G G L+G ++ + L D R TNP Sbjct: 180 EQPPYNLLDRRIERELLPVAETFGLAVIPWSPIGGGLLSGKYRKGQPLPLDS-RYTNPNP 238 Query: 247 FQGENFA-RNLRLVDKVKEMAEHHGCTPSQLALAWVMAQDPHIVPIPGTKRRRYLEENAG 305 Q F R +++ + E+A G SQLALAWV Q I G + LE+ Sbjct: 239 MQARRFVDRVFDVIEPLSELAAEKGVPLSQLALAWVAQQRGVTSAITGPRTLEQLEDALQ 298 Query: 306 AFNVKLSSEDLLALEAIFPRGVAAGARY 333 A VKL+ EDL ++AI P G G Y Sbjct: 299 AIEVKLTPEDLQRIDAIIPPGTHVGPFY 326 >gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxidoreductase [Janthinobacterium sp. Marseille] Length = 277 Score = 132 bits (332), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 150/305 (49%), Gaps = 49/305 (16%) Query: 23 NGPLVSAIGLGCMGMSDFYARRDDAESLATIDRALELGINLLDTADMYGPYTNEELLGRA 82 +G V +G G M D RR A+ +A++ L+LG+ L+DTA+MYG +E+L+G A Sbjct: 8 SGLAVPVLGQGTWYMGDEAHRR--ADEIASLRLGLDLGMTLIDTAEMYGDGASEKLVGEA 65 Query: 83 IQGRRDKFFIATKFGIRRDPADPQARGVDGSPAYIRQAVEGSLRRLGVDTIDLYYQHRID 142 I GRRD+ F+ +K P G+ A A E SLRRLG D IDLY H Sbjct: 66 IAGRRDEVFLVSKVL-------PSNASRSGTIA----ACERSLRRLGTDCIDLYLLH-WR 113 Query: 143 PATPIEATMGVLADLVRAGKIRYIGLSEASAATLERAHRVHPVTAL---QSEYSLWTRDP 199 TP T+ L AGKIR+ G+S + R A+ Q Y+L R Sbjct: 114 GRTPFAETIAAFEALQDAGKIRHWGVSNMDVDDMREIARAPGGDAMATNQVLYNLTRRGI 173 Query: 200 EAEVLATCRALGIGFVAYSPLGRGFLTGAIQRFEDLAEDDFRRTNPRFQGENFARNLRLV 259 E ++L +A G+ +AYSP+ +G LT Sbjct: 174 EFDLLPQAQARGLPLMAYSPIEQGRLTE-------------------------------Y 202 Query: 260 DKVKEMAEHHGCTPSQLALAWVMAQDPHIVPIPGTKRRRYLEENAGAFNVKLSSEDLLAL 319 +V ++A+ HG TP+Q+ALAWV+ Q+ ++ IP ++ EN A +++L++EDL L Sbjct: 203 PEVLDIADRHGVTPAQVALAWVLRQE-GVIAIPKASTPEHVRENRAALDLQLTAEDLEEL 261 Query: 320 EAIFP 324 + +FP Sbjct: 262 DDMFP 266 >gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxidoreductase TAS [Janthinobacterium sp. Marseille] Length = 349 Score = 112 bits (281), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 112/346 (32%), Positives = 156/346 (45%), Gaps = 44/346 (12%) Query: 18 RRLGSNGPLVSAIGLGCMGMSDFYARRDDAESLATIDRALELGINLLDTADMY----GPY 73 ++LG VS I LG M + + +AE+ A +D A+ G+NL+D A+MY P Sbjct: 4 QQLGKTDIKVSNIALGTMTWGE---QNTEAEAHAQLDMAIAAGVNLIDAAEMYPVPPKPE 60 Query: 74 TN---EELLGRAIQ--GRRDKFFIATKF-GIRRDPADPQARGVDGSPAYIR----QAVEG 123 T E LG ++ G+RD+ IATK G R P PQ G ++ R A+ G Sbjct: 61 TQGLTERYLGTWLKKSGKRDQLIIATKAAGPARLPHQPQ-HVRHGKTSFDRASLTDALHG 119 Query: 124 SLRRLGVDTIDLY----------------YQHRIDPAT-PIEATMGVLADLVRAGKIRYI 166 +L RL D IDLY Y H D T PI T+ VLAD V+ GKIRYI Sbjct: 120 NLERLQTDYIDLYQLHWPDRSVNIFGRQNYTHFPDEDTVPIAETLSVLADFVKQGKIRYI 179 Query: 167 GLSEASAATLERAHRVHP------VTALQSEYSLWTRDPEAEVLATCRALGIGFVAYSPL 220 G+S + L + R + ++Q+ YSL R E + IG +AYSPL Sbjct: 180 GVSNETPWGLAQFLRASEQLNLPRIVSIQNPYSLVNRYFEIALSEFSHQEQIGLLAYSPL 239 Query: 221 GRGFLTGAIQRFEDLAEDDFRRT-NPRFQGENFARNLRLVDKVKEMAEHHGCTPSQLALA 279 G L+G + D R T RF + V+ +A HG P+Q+ALA Sbjct: 240 AFGVLSG--KYLHGARPADGRITLFERFVRYKAPQVETAVEAYVALARKHGLDPAQMALA 297 Query: 280 WVMAQDPHIVPIPGTKRRRYLEENAGAFNVKLSSEDLLALEAIFPR 325 +V + I G L+ N + N++L L +E I R Sbjct: 298 YVNTRPFLTSTIIGATTLGQLQSNLDSINLELDEAVLNGIEEIHNR 343 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.320 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 821,361 Number of extensions: 34804 Number of successful extensions: 109 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 95 Number of HSP's successfully gapped: 5 Length of query: 343 Length of database: 1,221,021 Length adjustment: 84 Effective length of query: 259 Effective length of database: 910,473 Effective search space: 235812507 Effective search space used: 235812507 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)