BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3295.p (400 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 627 0.0 gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 211 6e-56 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 139 3e-34 gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-am... 126 2e-30 gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate... 125 3e-30 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 627 bits (1616), Expect = 0.0, Method: Compositional matrix adjust. Identities = 297/400 (74%), Positives = 340/400 (85%) Query: 1 MQYSQSDANKLMYVTNRPELVFTEGQGMWLTDHHGKRYLDYLQGWAVNTLGHAPQCIADA 60 M++SQ N L+Y+TNRPELVFTEG GMWLTDH GKRYLDYLQGWAVN LGH+PQCI DA Sbjct: 1 MEFSQYPVNSLLYITNRPELVFTEGDGMWLTDHKGKRYLDYLQGWAVNCLGHSPQCIQDA 60 Query: 61 LAAQSKKLINPSPAFYNAPSMELAKLLTDNSVFDRVFFANSGAEANEGAIKLARKWGKKN 120 L Q+KKLINPSPAFYN PS+ LA LLT NS FDRVFFANSGAEANE A+KLARKWGK N Sbjct: 61 LNVQAKKLINPSPAFYNEPSIALAALLTGNSCFDRVFFANSGAEANESAVKLARKWGKLN 120 Query: 121 PAGDGSARFEIITFKHSFHGRTLATMSASGKDGWDTMFAPQVPGFPKATLNDLASVEALI 180 G R+EIITF HSFHGRTLATMSASGK GWDT++APQVPGF KATLND+ SV+ LI Sbjct: 121 KNAAGENRYEIITFDHSFHGRTLATMSASGKAGWDTIYAPQVPGFFKATLNDIDSVKKLI 180 Query: 181 GSHTVAVMLEPVQGEGGVIPASKEFMQGLRRLTKEKNLLLIVDEVQSGMGRTGQLFAYQH 240 T+AVMLEPVQGEGGVIPA++EFMQ LR LTKE +LLIVDEVQ+GMGRTG+LF YQ Sbjct: 181 TDKTIAVMLEPVQGEGGVIPATREFMQALRALTKEHGVLLIVDEVQTGMGRTGELFGYQL 240 Query: 241 SGIEPDIMTLAKGIGGGVPLAALLAREEIACFEAGEQGGTYNGNPLMTAVGVAVIKELLK 300 SGI PDIMTL KGIGGGVPLAA+L REEIACFE G+QGGTYNGNPLMTAVG AV + LL Sbjct: 241 SGITPDIMTLGKGIGGGVPLAAMLCREEIACFEPGDQGGTYNGNPLMTAVGNAVAQALLA 300 Query: 301 PGFMETVRERGQYLRQRSLEISEKYGFEGERGEGLLRAMQLGRDIGPQIVEAARNLEPVG 360 PGF+++V+++G YL L+++EK+G GERG+GLLRA++LG DIGPQIVE AR+LEPVG Sbjct: 301 PGFLQSVKDKGAYLSAALLKLTEKHGLAGERGDGLLRALKLGSDIGPQIVEKARDLEPVG 360 Query: 361 LLLNSPRPNLLRFMPALNVSKEEIDQMFSMLEEVLAKIGK 400 LLLNSPRP+LLRFMPALNV+ EE+DQM ML VL+++ + Sbjct: 361 LLLNSPRPDLLRFMPALNVTYEELDQMIEMLSGVLSELKR 400 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 211 bits (537), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 132/381 (34%), Positives = 199/381 (52%), Gaps = 11/381 (2%) Query: 20 LVFTEGQGMWLTDHHGKRYLDYLQGWAVNTLGHAPQCIADALAAQSKKLINPSPAFYNAP 79 +V ++G+G+WL D GKRY+D + ++ + GH+ + AL Q+ +L S AFY Sbjct: 27 VVLSKGRGIWLWDEDGKRYMDMMSAYSAVSFGHSHPQLVQALTQQAGQLAVTSRAFYTDQ 86 Query: 80 SMELAKLLTDNSVFDRVFFANSGAEANEGAIKLARKWGKKNPAGDGSARFEIITFKHSFH 139 +LL + + D+ NSG EA E ++K ARKW K G + +II +F Sbjct: 87 LGRFLQLLCEMTGMDKALPMNSGTEAVETSLKAARKWAYKV-KGVPDQQAQIIVCAGNFA 145 Query: 140 GRTLATMSASGKDGWDTMFAPQVPGFPKATLNDLASVEALIGSHTVAVMLEPVQGEGGVI 199 GR+ + S + + F P GF D A++EA I HT A ++EP+QGEGG+I Sbjct: 146 GRSTTIVGFSSEAQYREGFGPFDGGFVTIPYGDAAALEAAITPHTAAFLVEPIQGEGGII 205 Query: 200 PASKEFMQGLRRLTKEKNLLLIVDEVQSGMGRTGQLFAYQHSGIEPD-IMTLAKGIGGGV 258 ++ R + +N+LLI DEVQ+G+GRTG+L A H GI PD ++ GG + Sbjct: 206 VPPDAYLAQCREICTRRNILLICDEVQTGLGRTGRLLACDHEGIRPDGLILGKALGGGLL 265 Query: 259 PLAALLAREEIA-CFEAGEQGGTYNGNPLMTAVGVAVIKELLKPGFMETVRERGQYLRQR 317 P++A LAR E+ F G+ G T+ GNPL AVG A + L + +RGQ LR+ Sbjct: 266 PVSAFLARSEVMDVFTPGDHGSTFGGNPLAAAVGYAALSLLRDGELIAAAEQRGQRLRE- 324 Query: 318 SLEISEKYGFEGERGEGLLRAMQLGRDIGPQIVEAARNLEPV---GLLLNSPRPNLLRFM 374 L RG+GLL +G ++ PQ++ A E + G+L ++RF Sbjct: 325 GLNALRHPAIRSVRGKGLL----IGLELEPQVITARSFCERLMENGVLSKETHHTVVRFA 380 Query: 375 PALNVSKEEIDQMFSMLEEVL 395 P L ++ E ID ++E V Sbjct: 381 PPLIITAEAIDAALRIIEHVF 401 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 139 bits (350), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/418 (27%), Positives = 188/418 (44%), Gaps = 38/418 (9%) Query: 18 PELVFTEGQGMWLTDHHGKRYLDYLQGWAVNTLGHAPQCIADALAAQSKKLINPSPA-FY 76 P + + G+G WL D G+RYLD + W VN GHA I AL +Q L + A F Sbjct: 35 PLIPVSHGRGAWLYDTDGQRYLDAISSWWVNMFGHANPRINSALRSQLDMLEHAMLAGFT 94 Query: 77 NAPSMELAKLLT--DNSVFDRVFFANSGAEANEGAIKLARKWGKKNPAGDGSARFEIITF 134 + P ++L++ L N F+A+ GA A E A+K++ + N D + E + Sbjct: 95 HEPVVQLSEQLAARTNHELGHCFYASDGASAVEIALKMSFHSWRNNGLSD---KREFVCL 151 Query: 135 KHSFHGRTLATMSASG----KDGWDTMFA-PQVPGFPKA-------TLNDLA-----SVE 177 K S+HG T+ ++ + +D +D M V P A T D+A ++E Sbjct: 152 KGSYHGETIGALAVTDVPIFRDAYDAMLQHAHVVMSPDARAARDGETAADVARRAASALE 211 Query: 178 ALI---GSHTVAVMLEP-VQGEGGVIPASKEFMQGLRRLTKEKNLLLIVDEVQSGMGRTG 233 L+ H A+++EP VQ G+ ++Q +R L + + LI DE+ G GRTG Sbjct: 212 TLLQERSKHIAALIVEPLVQCATGMAMYDPVYLQEVRALCDKYQVHLIADEIAVGCGRTG 271 Query: 234 QLFAYQHSGIEPDIMTLAKGIGGG-VPLAALLAREEI-ACFEAGE------QGGTYNGNP 285 FA + + + PD + L+KGI GG +PL+ ++ R+EI F G+ +Y GNP Sbjct: 272 TFFACEQAAVWPDFLCLSKGISGGYLPLSLVMTRDEIYQSFYHGDVTRGFLHSHSYTGNP 331 Query: 286 LMTAVGVAVIKELLKPGFMETVRERGQYLRQRSLEISEKYGFEGERGEGLLRAMQLGRDI 345 L +A + + + R R L + ++ R G++ A D Sbjct: 332 LACRAALATLAIFEEDDVINANRLRAARLTEALAPLAAHPQVSNFRQRGMIWAFDAVIDN 391 Query: 346 GPQIVEAARNLEPVGL---LLNSPRPNLLRFMPALNVSKEEIDQMFSMLEEVLAKIGK 400 +R L LL P + MP ++ EEID + + + V K+ + Sbjct: 392 AEAASTFSRRFFTTALEHELLLRPIGPTVYLMPPYILNNEEIDGLAARTQTVFEKVMR 449 >gi|152979840|ref|YP_001354649.1| glutamate-1-semialdehyde 2,1-aminomutase [Janthinobacterium sp. Marseille] Length = 432 Score = 126 bits (317), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 155/313 (49%), Gaps = 36/313 (11%) Query: 14 VTNRPELVFTEGQGMWLTDHHGKRYLDYLQGWAVNTLGHAPQCIADALAAQSKKLINPSP 73 V P + T+ +G + D +RY+DY+ W +GHA + A+ + + ++ Sbjct: 30 VGGTPRFI-TKAEGPYFWDADDRRYIDYIGSWGPAIVGHAHPDVVKAVQDAATRGLS--- 85 Query: 74 AFYNAPS---MELAKLLTD-NSVFDRVFFANSGAEANEGAIKLARKWGKKNPAGDGSARF 129 + AP+ +E+A+L+ ++V +SG EA A++LAR + R Sbjct: 86 --FGAPTEAEIEMAELICRLVPSIEQVRLVSSGTEAAMSALRLARG---------ATGRD 134 Query: 130 EIITFKHSFHGRTLATMSASGKDGWDTMFAPQVPGFP----KATL----NDLASVEAL-- 179 +II F+ +HG + + +G G T P G P K TL ND A +E + Sbjct: 135 KIIKFEGCYHGHADSLLVKAGS-GLLTFGNPTSAGVPEDFAKHTLVLDYNDPAQLENVFK 193 Query: 180 -IGSHTVAVMLEPVQGEGGVIPASKEFMQGLRRLTKEKNLLLIVDEVQSGMGRTGQLFAY 238 +G V++EPV G ++PA+ EF+Q +RR+ + ++I+DEV SG R A Sbjct: 194 EMGDSIACVIVEPVAGNMNLLPATPEFLQTMRRVCTQYGAVMILDEVMSGF-RVALGGAQ 252 Query: 239 QHSGIEPDIMTLAKGIGGGVPLAALLAREEI----ACFEAGEQGGTYNGNPLMTAVGVAV 294 GI PD+ L K IGGG+P+AA R +I A Q GT +GNP+ A G+A Sbjct: 253 SLYGITPDLTVLGKVIGGGLPVAAFGGRADIMRHLAPLGGVYQAGTLSGNPVTVAAGMAT 312 Query: 295 IKELLKPGFMETV 307 +K + PGF E + Sbjct: 313 LKLIQAPGFYENL 325 >gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate aminotransferase [Janthinobacterium sp. Marseille] Length = 431 Score = 125 bits (315), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 38/310 (12%) Query: 13 YVTNRPELVFTEGQGMWLTDHHGKRYLDYLQGWAVNTLGH----APQCIADALAAQS--- 65 Y+ + P VF + Q LTD G+ Y+D+L G GH Q + D L+ Sbjct: 14 YIRSFPT-VFAKAQNAVLTDEGGRSYIDFLAGAGTLNYGHNNPTMKQAVIDYLSEDGIVH 72 Query: 66 --KKLINPSPAFYNAPSMELAKLLTDNSVFDRVFFANSGAEANEGAIKLARKWGKKNPAG 123 + F + E LL + F +G A E AIKLAR Sbjct: 73 GLDMATSAKKTFLQ--TFESHVLLPRKMQYKIQFTGPTGTNAVEAAIKLAR--------- 121 Query: 124 DGSARFEIITFKHSFHGRTLATMSASGKDGW---------DTMFAPQVPGFPKATLNDLA 174 + + R +I+F + FHG +L +++ +G + D AP G+ ++ +A Sbjct: 122 NVTGRQMVISFTNGFHGVSLGSLALTGNRKFRDAAGVSLNDVHRAP-YSGYFGMNIDTIA 180 Query: 175 SVEALIGSHT------VAVMLEPVQGEGGVIPASKEFMQGLRRLTKEKNLLLIVDEVQSG 228 ++ LI + A+++E VQGEGG+ A +++ L +L + +LLIVD++Q+G Sbjct: 181 MLDKLIVDPSSGVDLPAAIIVECVQGEGGLNVAGLNWLKKLEQLCQRHEILLIVDDIQAG 240 Query: 229 MGRTGQLFAYQHSGIEPDIMTLAKGIGG-GVPLAALLAREEIACFEAGEQGGTYNGNPLM 287 GRTG F+++ +GI+PDI+TL+K + G G+P+A LL + ++ ++ G+ GT+ GN L Sbjct: 241 CGRTGTFFSFEPAGIKPDIITLSKSLSGFGLPMAVLLMKPQLDVWKPGQHNGTFRGNNLA 300 Query: 288 TAVGVAVIKE 297 A ++ Sbjct: 301 FVTATAALQH 310 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.317 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 888,490 Number of extensions: 36940 Number of successful extensions: 131 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 114 Number of HSP's successfully gapped: 6 Length of query: 400 Length of database: 1,221,021 Length adjustment: 85 Effective length of query: 315 Effective length of database: 906,776 Effective search space: 285634440 Effective search space used: 285634440 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)