BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.3271.p (455 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980459|ref|YP_001352656.1| glutathione reductase [Janthino... 416 e-117 gi|152983056|ref|YP_001352644.1| mercuric reductase [Janthinobac... 189 3e-49 gi|152981182|ref|YP_001353439.1| putative mercuric reductase [Ja... 181 8e-47 gi|152980382|ref|YP_001353204.1| dihydrolipoamide dehydrogenase ... 171 7e-44 gi|152979891|ref|YP_001352366.1| dihydrolipoamide dehydrogenase ... 152 5e-38 >gi|152980459|ref|YP_001352656.1| glutathione reductase [Janthinobacterium sp. Marseille] Length = 462 Score = 416 bits (1069), Expect = e-117, Method: Compositional matrix adjust. Identities = 214/456 (46%), Positives = 294/456 (64%), Gaps = 7/456 (1%) Query: 1 MSQYDYDLFTIGGGSGGVRAARFAGQAGARVGLAEKGELGGTCVNVGCIPKKLMSYSAHY 60 M YDYDLF IGGGSGGVRA+R A G RV +AE+ GGTCV GC+PKKL Y++ + Sbjct: 1 MITYDYDLFVIGGGSGGVRASRLAASLGKRVAIAEEYRFGGTCVIRGCVPKKLFVYASQF 60 Query: 61 HEDFADAAGYGWTLHSQPSFDWVALIANKDREIAHLNDIYQRLLDGANVTLHRGFATVED 120 HE F DA GYGW + + +F+W L A KD+EIA L +Y++ L+ V + A + D Sbjct: 61 HEHFEDAVGYGWEV-GKNTFNWKKLTAAKDKEIARLEGLYRQGLENNGVEIVESRAELID 119 Query: 121 AHTVNVD--GQRFTARHILVATGGHPDK-PQIAGSEWGITSDDFFHLPGLPQRAVVLGGG 177 AHT+ + G+ TA I++ATGG P+ + G E I+S++ F LP LP+ ++ GGG Sbjct: 120 AHTIRLTKTGRTVTAEKIVIATGGTPNPHAALPGHELCISSNEAFDLPELPRSILIAGGG 179 Query: 178 YIAVELASILNGLGSEVTLVYRRERLLRNMDADLGIHLADEMAKKGIRLIFNASIDAIEA 237 YIAVE A+I +GLG+ VTL+YR + +L D D+ L M +KGIR++ I+ I Sbjct: 180 YIAVEFANIFHGLGAHVTLIYRGKEILSRFDQDMRHGLHKAMTEKGIRIMLTDVIENISK 239 Query: 238 AHAGPDSLKQVHLTNGETLAAECVLFATGRTPNTRGLGLEQAGVALKENGAVLVNDNFES 297 G K NGE++ + V+ A GR PNT+GLGLE AGV + E GA++V+ + Sbjct: 240 TAEGGLMAKT---KNGESMVVDSVMLALGRDPNTQGLGLEAAGVEINERGAIIVDKYSRT 296 Query: 298 SVPSILAVGDVIDRVALTPVALAEAMAVVARLFGQGERSMSYRNIPTAVFSHPNVGTVGL 357 +VP+I A+GDV DRV LTPVA+ EAM + + + + I TAVFS P +GTVGL Sbjct: 297 NVPNIYALGDVTDRVQLTPVAIHEAMCFIETEYKNNPTAPDHDVIATAVFSQPEIGTVGL 356 Query: 358 SEEQARSEHGEVKIFKTDFKPLKNTLSRNTERTFMKLVVDAKSDRVLGVHMVGGDAGEVI 417 SEE A H E+ I++ +F+P+K T+S E+T MKL+VDA S +VLG H++G DAGE++ Sbjct: 357 SEEDAVKRHSELDIYRAEFRPMKTTISGRVEKTIMKLIVDAVSRKVLGAHILGHDAGEMV 416 Query: 418 QGFAVALQCGATKAQFDTTIGIHPTSAEEFVTLRTP 453 Q VAL+ G TK FD T+ +HPT+AEEFVT+ P Sbjct: 417 QLLGVALKAGVTKEDFDRTMAVHPTAAEEFVTMYKP 452 >gi|152983056|ref|YP_001352644.1| mercuric reductase [Janthinobacterium sp. Marseille] Length = 474 Score = 189 bits (480), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 127/448 (28%), Positives = 209/448 (46%), Gaps = 4/448 (0%) Query: 6 YDLFTIGGGSGGVRAARFAGQAGARVGLAEKGELGGTCVNVGCIPKKLMSYSAHYHEDFA 65 +D IG G A +G R+ + E+ +GGTCVN GC P K M SA+ A Sbjct: 20 FDAIIIGTGQAAPALANRLTASGMRIAVIERSSVGGTCVNTGCTPTKTMVASAYVARMAA 79 Query: 66 DAAGYGWTLHSQPSFDWVALIANKDREIAHLNDIYQRLLDG-ANVTLHRGFATVEDAHTV 124 AA YG LH P+ D A+ A D+ + + + G TL RG A E + V Sbjct: 80 RAAEYGVVLHHPPAIDMKAIKARVDKIVQTDRVGLENWMTGMPGCTLIRGHARFESGNEV 139 Query: 125 NVDGQRFTARHILVATGGHPDKPQIAGSE--WGITSDDFFHLPGLPQRAVVLGGGYIAVE 182 VD +R A I + GG P G E +T+ D L +P +++GG YI +E Sbjct: 140 CVDDRRIKANKIFINVGGRAFIPDAVGLENISYLTNTDMVALDIVPSHLIIVGGSYIGLE 199 Query: 183 LASILNGLGSEVTLVYRRERLLRNMDADLGIHLADEMAKKGIRLIFNASIDAIEAAHAGP 242 A + GS VT++ R RL+ D ++ + D ++ + I ++ +A + HA Sbjct: 200 FAQMFRRFGSSVTVIERGSRLIAREDEEVSAQIKDILSNEDISIMLDAEELQFQK-HAAG 258 Query: 243 DSLKQVHLTNGETLAAECVLFATGRTPNTRGLGLEQAGVALKENGAVLVNDNFESSVPSI 302 ++ + + ++ +L A GR PNT LGL++AG+ G + V++ ++ + Sbjct: 259 VAVNVKCKNDWKKISGSHLLIAVGRRPNTDDLGLDKAGIETDTMGYITVDEQLRTTANGV 318 Query: 303 LAVGDVIDRVALTPVALAEAMAVVARLFGQGERSMSYRNIPTAVFSHPNVGTVGLSEEQA 362 A+GD R A T A + V A L R +S R A++ P +G VG++ QA Sbjct: 319 WALGDCNGRGAFTHTAYNDFEIVAANLLDGETRCVSDRIPAYALYIDPPLGRVGMTATQA 378 Query: 363 RSEHGEVKIFKTDFKPLKNTLSRNTERTFMKLVVDAKSDRVLGVHMVGGDAGEVIQGFAV 422 + ++++ + + + + M++VVDA+++ +LG ++G E I Sbjct: 379 KKAGRKIRVGTRQMTRVARAIEKGETQGSMRVVVDAETNEILGAAILGPGGDEAIHAILA 438 Query: 423 ALQCGATKAQFDTTIGIHPTSAEEFVTL 450 + A Q T+ IHPT +E T+ Sbjct: 439 TMAAKAPYTQLTHTMAIHPTLSELIPTM 466 >gi|152981182|ref|YP_001353439.1| putative mercuric reductase [Janthinobacterium sp. Marseille] Length = 561 Score = 181 bits (459), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 141/430 (32%), Positives = 217/430 (50%), Gaps = 22/430 (5%) Query: 8 LFTIGGGSGGVRAARFAGQAGARVGLAEKGELGGTCVNVGCIPKKLMSYSAHYHEDFADA 67 + IG G + AA A + GA V L E+G +GGTCVNVGC+P K+M +AH ++ Sbjct: 101 VVVIGSGGAAMAAALKAVEQGAHVSLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRES 160 Query: 68 AGYGWTLHSQPSFDWVALIANKDREIAHLNDI-YQRLLDG-ANVTLHRGFATVEDAHT-- 123 G + P+ D L+A + + L Y+ +LDG +T+ G A +D + Sbjct: 161 PFDGGIAATVPAIDRSKLLAQQQARVDELRHAKYEGILDGNPAITVVHGEARFKDEQSLV 220 Query: 124 --VNVDGQRFTA-RHILVATGGHPDKPQIAGSE----WGITSDDFFHLPGLPQRAVVLGG 176 +N G+R A LVATG P P I G + W TS + LP+R V+G Sbjct: 221 VRLNDGGERVVAFDRCLVATGASPAVPPIPGLKESPYW--TSTEALVSDTLPERLAVIGS 278 Query: 177 GYIAVELASILNGLGSEVTLVYRRERLLRNMDADLGIHLADEMAKKGIRLIFNASIDAIE 236 +A+ELA LGS+VT++ R R+ D +G + +GI+++ + A + Sbjct: 279 SVVALELAQAFARLGSQVTILARNTLFFRD-DPSIGEAVTAAFRAEGIKVLEHTQ--ASQ 335 Query: 237 AAHAGPDSLKQVHLTNGE-TLAAECVLFATGRTPNTRGLGLEQAGVALKENGAVLVNDNF 295 AH + + LT G + A+ +L ATGRTPNTR L L+ AGV + GA++++ Sbjct: 336 VAHVNGEFV----LTTGHGEVRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDKGM 391 Query: 296 ESSVPSILAVGDVIDRVALTPVALAEAMAVVARLFGQGERSMSYRNIPTAVFSHPNVGTV 355 +S P I A GD D+ VA A + G G+ +++ +P VF+ P V TV Sbjct: 392 RTSTPHIYAAGDCTDQPQFVYVAAAAGTRAAINMTG-GDAAINLTAMPAVVFTDPQVATV 450 Query: 356 GLSEEQARSEHGEVKIFKTDFKPLKNTLSRNTERTFMKLVVDAKSDRVLGVHMVGGDAGE 415 G SE +A + E + L+ R F+KLV++ S R++GV +V +AGE Sbjct: 451 GYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSGRLIGVQVVAPEAGE 510 Query: 416 VIQGFAVALQ 425 +IQ +A++ Sbjct: 511 LIQTAVLAIR 520 >gi|152980382|ref|YP_001353204.1| dihydrolipoamide dehydrogenase [Janthinobacterium sp. Marseille] Length = 475 Score = 171 bits (434), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 146/472 (30%), Positives = 229/472 (48%), Gaps = 40/472 (8%) Query: 1 MSQYDYDLFTIGGGSGGVRAARFAGQAGARVGLA-----EKG--ELGGTCVNVGCIPKK- 52 MS+ ++D+ IG G GG AA A Q G V EKG GGTC NVGCIP K Sbjct: 1 MSK-NFDVVVIGAGPGGYVAAIRAAQLGFTVACIDEWKNEKGGPAPGGTCTNVGCIPSKA 59 Query: 53 LMSYSAHYHEDFADAAGYGWTLHSQP----SFDWVALIANKDREIAHLNDIYQRLLDGAN 108 ++ S +YH AG+ + H S + ++A KD + ND L Sbjct: 60 MLQSSENYHH-----AGHAFAEHGIEVKGLSLNVKKMVARKDTVVKQNNDGILYLFKKNK 114 Query: 109 VTLHRG---FATVEDA-HTVNVDG---QRFTARHILVATGGHPDK-PQIAGSEWGITSDD 160 VT G F D H + + G + A+H++VATG +P P A E I S+ Sbjct: 115 VTFFHGRGSFVKAADGGHEIKIAGATEENIFAKHVVVATGSNPRALPGAAFDEKLILSNT 174 Query: 161 -FFHLPGLPQRAVVLGGGYIAVELASILNGLGSEVTLVYRRERLLRNMDADLGIHLADEM 219 + +P+R V+G G I +E+ S+ LGSEVT++ L +D + + Sbjct: 175 GALEITEVPKRLGVIGAGVIGLEMGSVWRRLGSEVTVLEALPAFLGAVDDAVAKEAFKQF 234 Query: 220 AKKGIRLIFNASIDAIEAAHAGPDSLKQVHLTNGETLAAECV----LFATGRTPNTRGLG 275 K+G+ + I AI A G + + V+ + + A + V + + GR PNT GL Sbjct: 235 TKQGLAISLGVQIGAITA---GKNDV-TVNYVDDKGAAQKAVFDKLIVSIGRVPNTIGLN 290 Query: 276 LEQAGVALKENGAVLVNDNFESSVPSILAVGDVIDRVALTPVALAEAMAVVARLFGQGER 335 E G+ L E G + V+ + ++S+P++ AVGDV+ L + E +AV R+ GQ Sbjct: 291 AEAVGLKLDERGFIAVDADCKTSLPNVWAVGDVVRGPMLAHKSEEEGVAVAERIAGQ-HG 349 Query: 336 SMSYRNIPTAVFSHPNVGTVGLSEEQARSEHGEVKIFKTDFKPLKNTLSRNTERT--FMK 393 +++ IP +++ P + VG +E+Q ++E ++ F L N +R T F+K Sbjct: 350 HVNFNTIPWVIYTSPEIAWVGKTEQQLKAE--KIAYKAGSFPFLANGRARALGDTTGFVK 407 Query: 394 LVVDAKSDRVLGVHMVGGDAGEVIQGFAVALQCGATKAQFDTTIGIHPTSAE 445 + DAK+D +LGVH++G A E+I VA++ A+ HP+ +E Sbjct: 408 FLADAKTDEILGVHIIGPMASELISEAVVAMEFRASSEDIARICHAHPSLSE 459 >gi|152979891|ref|YP_001352366.1| dihydrolipoamide dehydrogenase [Janthinobacterium sp. Marseille] Length = 603 Score = 152 bits (384), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 125/464 (26%), Positives = 219/464 (47%), Gaps = 28/464 (6%) Query: 2 SQYDYDLFTIGGGSGGVRAARFAGQAGARVGLAEK-GELGGTCVNVGCIPKKLMSYSAHY 60 + + D+ +G G GG AA A G L E+ LGG C+NVGCIP K + + A Sbjct: 130 ADIECDMMVLGAGPGGYSAAFRAADLGMSTVLIERYSTLGGVCLNVGCIPSKALLHVAAV 189 Query: 61 HEDFADAAGYGWTLHSQPSFDWVALIANKDREIAHLNDIYQRLLDGANVTLHRGFATVED 120 ++ A A +G T +P D L K++ I + + V + +G Sbjct: 190 IDETASMAAHGVTF-GKPQIDIDKLRGYKEQVIGKMTTGLAGMAKARKVNVVQGVGQFVG 248 Query: 121 AHTVNV---DGQRFTA--RHILVATGGH-------PDKPQIAGSEWGITSDDFFHLPGLP 168 + + V DG + T + ++A G P P+I + S L +P Sbjct: 249 PNHIEVTAADGSKKTIQFKQAIIAAGSSVVNLPFVPQDPRI------VDSTGALELRSVP 302 Query: 169 QRAVVLGGGYIAVELASILNGLGSEVTLVYRRERLLRNMDADLGIHLADEMAKKGIRLIF 228 +R +V+GGG I +E+A++ + LG+ + +V + L++ D D+ K+ +++ Sbjct: 303 KRMLVIGGGIIGLEMATVYSTLGARIDVVEMMDGLMQGADRDMVKVWQKFNEKRFDKIML 362 Query: 229 NASIDAIEAAHAGPD---SLKQVHLTNGETLAAECVLFATGRTPNTRGLGLEQAGVALKE 285 A+EA G + T E + VL A GR+PN + + ++AGVA+ + Sbjct: 363 KTKTVAVEALKEGIKVSFEAAEAGATAPEPQVYDMVLVAVGRSPNGKKIAADKAGVAVTD 422 Query: 286 NGAVLVNDNFESSVPSILAVGDVIDRVALTPVALAEAMAVVARLFGQGERSMSYRNIPTA 345 G + V+ ++VP I A+GD++ + L A+ EA G+ + R IP+ Sbjct: 423 RGFIEVDAQMRTNVPHIFAIGDLVGQPMLAHKAVHEAHVAAEAAAGE-KAYFDARVIPSV 481 Query: 346 VFSHPNVGTVGLSEEQARSEHGEVKIFKTDFKPLKN--TLSRNTERTFMKLVVDAKSDRV 403 ++ P V VG++E++A+++ +K+ K F + ++ + F KL+ DA++ R+ Sbjct: 482 AYTDPEVAWVGITEDEAKAKG--IKLEKGHFPWAASGRAVANGRDEGFTKLLFDAETHRI 539 Query: 404 LGVHMVGGDAGEVIQGFAVALQCGATKAQFDTTIGIHPTSAEEF 447 +G +VG AG++I A+A++ GA TI HPT E Sbjct: 540 VGGGIVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESI 583 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.319 0.136 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,086,071 Number of extensions: 47447 Number of successful extensions: 175 Number of sequences better than 1.0e-08: 9 Number of HSP's gapped: 151 Number of HSP's successfully gapped: 9 Length of query: 455 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 369 Effective length of database: 903,079 Effective search space: 333236151 Effective search space used: 333236151 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)