BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3263.p
         (153 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980858|ref|YP_001353867.1| hypothetical protein mma_2177 [...   237   3e-64
gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [...    63   9e-12

>gi|152980858|ref|YP_001353867.1| hypothetical protein mma_2177
           [Janthinobacterium sp. Marseille]
          Length = 176

 Score =  237 bits (604), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 108/151 (71%), Positives = 135/151 (89%)

Query: 1   MKVSEILKVKGNILFTVTPDTPIQEAVNAMAEKDIGSLVVMEYGDLVGMLTFREVLLTLH 60
           MKVSEILKVKGNILFTVTPD+P+ +AVNAMAEKDIGSLVVME G+L+GMLTFREV+ T+H
Sbjct: 26  MKVSEILKVKGNILFTVTPDSPMLDAVNAMAEKDIGSLVVMEAGNLIGMLTFREVMATIH 85

Query: 61  QNGGALGGSTVRKHMNDAPITVTPDTDLNEVRRIMLEKHARYVPVMEARTLLGVMSFYDV 120
            NGGA+G  +VR++M+  P+T+T D ++NEVRR+MLEKHARYVPV++ + L+GV+SFYDV
Sbjct: 86  ANGGAVGSDSVRRYMDKHPMTITSDAEINEVRRLMLEKHARYVPVLDGKILVGVISFYDV 145

Query: 121 AKAVLDAQGFENKMLKAYIRDWPAEEEEREG 151
           AKAVL+AQ FENKMLK+YI+DWPA   E++G
Sbjct: 146 AKAVLEAQSFENKMLKSYIQDWPAVANEQDG 176


>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560
           [Janthinobacterium sp. Marseille]
          Length = 142

 Score = 62.8 bits (151), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 72/138 (52%)

Query: 3   VSEILKVKGNILFTVTPDTPIQEAVNAMAEKDIGSLVVMEYGDLVGMLTFREVLLTLHQN 62
           VS++L +K   L +    TP+ +A+  MA  D+G++VV++ G LVG+L+ R+    +   
Sbjct: 4   VSQLLMLKNKSLCSTCSRTPLIDALKIMAVHDVGAMVVIDEGKLVGILSERDYARKVALA 63

Query: 63  GGALGGSTVRKHMNDAPITVTPDTDLNEVRRIMLEKHARYVPVMEARTLLGVMSFYDVAK 122
             +     V   M     TV+ +  + E   +M + + R++PV E   ++GV+S  D+ K
Sbjct: 64  NKSSTDICVGDIMTSRVTTVSKEHTVEECMTLMSDGNFRHLPVTEKGFVIGVISIGDLVK 123

Query: 123 AVLDAQGFENKMLKAYIR 140
            V+  Q    + LK YI 
Sbjct: 124 EVISTQEETIQYLKTYIH 141


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.135    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 354,055
Number of extensions: 13888
Number of successful extensions: 57
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 2
Length of query: 153
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 77
Effective length of database: 940,049
Effective search space: 72383773
Effective search space used: 72383773
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)