BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3256.p
         (370 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980183|ref|YP_001353858.1| aspartate-semialdehyde dehydrog...   686   0.0  

>gi|152980183|ref|YP_001353858.1| aspartate-semialdehyde
           dehydrogenase [Janthinobacterium sp. Marseille]
          Length = 368

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/367 (90%), Positives = 349/367 (95%)

Query: 1   MKLVGLVGWRGMVGSVLMQRMQDEGDFDHIEPVFFSTSNAGGKAPSFAKKETTLKDANSI 60
           MK+VGLVGWRGMVGSVLMQRMQ+EGDFDHIE VFFSTSN GGKAP  AKKETTL+DAN +
Sbjct: 1   MKVVGLVGWRGMVGSVLMQRMQEEGDFDHIEAVFFSTSNKGGKAPVIAKKETTLQDANDL 60

Query: 61  EELKKCDIIITAQGGDYTNEIFPKLRAAGWDGYWIDAASSLRMKDDAVIVLDPVNSNVIK 120
           E LKKCDIIIT QGGDYT EIFP+LRAAGWDGYWIDAAS+LRMKDDAVIVLDPVN NVIK
Sbjct: 61  EALKKCDIIITCQGGDYTTEIFPQLRAAGWDGYWIDAASTLRMKDDAVIVLDPVNQNVIK 120

Query: 121 DALAKGVKNYIGGNCTNSILLMGVGGLFKEGLVEWVSSMTYQAASGGGANHMRELLKGMG 180
           DAL +GVKNYIGGNCTNSILLMGVGGLFKEGLVEWVSSMTYQAASGGGANHMRELL GMG
Sbjct: 121 DALNRGVKNYIGGNCTNSILLMGVGGLFKEGLVEWVSSMTYQAASGGGANHMRELLSGMG 180

Query: 181 VINAAVAEELATPSSAILDIDRKVAKTIREDVPTEFFGAPLAGGLIPWIDAQLENGQSKE 240
           V++ AVA ELATPSSAILDIDRKVA+ IR+DVPTEFFGAPLAGGLIPWIDAQLENGQSKE
Sbjct: 181 VVHGAVANELATPSSAILDIDRKVAEAIRKDVPTEFFGAPLAGGLIPWIDAQLENGQSKE 240

Query: 241 EWKGQAEVNKILGNEQIIPVDGLCVRIGAMRCHSLALTIKLKRDLPLAEIESIIRAGNQW 300
           EWKGQAEVNKILGN QIIPVDGLCVRIGAMRCHSLALTIKLKRDLPLAEIE+IIR+ N W
Sbjct: 241 EWKGQAEVNKILGNTQIIPVDGLCVRIGAMRCHSLALTIKLKRDLPLAEIETIIRSANPW 300

Query: 301 VKWVPNDRAITVKELTPAAITGGLEIGVGRVRKLNQGPEYISAFVIGDQLLWGAAEPLRR 360
           VKWV N+RA+TV+ELTPAAITGGLEIGVGRVRKLNQGPEYISAFVIGDQLLWGAAEPLRR
Sbjct: 301 VKWVANERAVTVQELTPAAITGGLEIGVGRVRKLNQGPEYISAFVIGDQLLWGAAEPLRR 360

Query: 361 MLRIILG 367
           MLRIILG
Sbjct: 361 MLRIILG 367


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 941,112
Number of extensions: 41208
Number of successful extensions: 105
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 105
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 285
Effective length of database: 906,776
Effective search space: 258431160
Effective search space used: 258431160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)