BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3252.p
         (222 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980562|ref|YP_001353855.1| N-(5'-phosphoribosyl)anthranila...   303   4e-84

>gi|152980562|ref|YP_001353855.1| N-(5'-phosphoribosyl)anthranilate
           isomerase [Janthinobacterium sp. Marseille]
          Length = 228

 Score =  303 bits (777), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 148/211 (70%), Positives = 169/211 (80%)

Query: 1   MSFRTRIKICGLTREEDVRATVAAGADALGLVFYPKSPRYVTPQRAGELARAVPPFVSMV 60
           M+ RTRIKICGLTR +DV++ V AGADA+G VFYPKSPRY+    AG L   +PPFV+ V
Sbjct: 1   MTHRTRIKICGLTRPQDVQSAVTAGADAVGFVFYPKSPRYIAAAAAGRLIAEIPPFVTPV 60

Query: 61  GLFVNPTLEEVQQVLAQAPLTVLQFHGDETPEQCAAIARAVVRPFIRAARIGSSTQPADL 120
           GLFVN T EEVQ ++AQAP+ +LQFHGDETPEQCAAIA+AV RPFIRA R+    + ADL
Sbjct: 61  GLFVNATPEEVQAIVAQAPIALLQFHGDETPEQCAAIAQAVNRPFIRAIRVKEGMRAADL 120

Query: 121 LEYEQAYRSASPLFTGLLLDTLVEEYGGSGKVFDWSLIPKELAPRAVLSGGLSVHNVTEA 180
           LEYE  YR+AS LFTGLLLD  V+ YGG GKVFDWSLIP+ +APR VLSGGLSV N T+A
Sbjct: 121 LEYESDYRAASTLFTGLLLDAFVDSYGGGGKVFDWSLIPENIAPRVVLSGGLSVQNATDA 180

Query: 181 VAGVRPYAVDISSGVEAAKGIKDAARIEAFI 211
           V  VRPYAVDISSGVE  KGIKDA +I AFI
Sbjct: 181 VLSVRPYAVDISSGVEQDKGIKDAVKIRAFI 211


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 515,611
Number of extensions: 21178
Number of successful extensions: 73
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 142
Effective length of database: 925,261
Effective search space: 131387062
Effective search space used: 131387062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)