BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3248.p
         (437 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980862|ref|YP_001353851.1| bifunctional folylpolyglutamate...   662   0.0  

>gi|152980862|ref|YP_001353851.1| bifunctional folylpolyglutamate
           synthase / dihydrofolate synthase [Janthinobacterium sp.
           Marseille]
          Length = 432

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/430 (73%), Positives = 360/430 (83%)

Query: 8   TPATLNEWLALLEQRHFKQIDMGLERVLAVKQKLDIRFDCPVIMVAGTNGKGSTCAMLES 67
            P TL +WL  LE  H K IDMGL+RV  VKQ +D++F CPVI+V GTNGKGSTCAMLES
Sbjct: 3   NPKTLADWLTRLEALHPKAIDMGLDRVREVKQAMDVQFACPVIIVGGTNGKGSTCAMLES 62

Query: 68  ILARAGYRVGLYIKPHFLHFNERARISGDMASDAQLIAAFEAVEAQRGEISLTYFEFTTL 127
           IL RAGYRVGLY  PH LHFNER R++G   +D +LIAAF+ +EA RG++SL+YFEFTTL
Sbjct: 63  ILLRAGYRVGLYTSPHLLHFNERMRVNGVSCTDQELIAAFDKLEAVRGDVSLSYFEFTTL 122

Query: 128 AIMKLLADAKQDVVILEVGLGGRLDAVNVVDADVAIVTSIDIDHTEYLGETREEIGFEKA 187
           A ++L ADAK D VI EVGLGGRLDAVNV+DADVAIVTS+DIDHTEYLG+TRE+IGFEKA
Sbjct: 123 AAIQLFADAKLDAVIFEVGLGGRLDAVNVLDADVAIVTSVDIDHTEYLGDTREKIGFEKA 182

Query: 188 GIFRPGKVAVCGDPLPPKSLIAHAEKIGADLWLMGRDYNYQGDKQQWAYGGRAMRRNSLA 247
           GIFR GK A+CGDP+PP SL+ HAEKIGADLWL  RD+NY GDKQQW + GR  RRNSL 
Sbjct: 183 GIFRAGKTAICGDPVPPASLVEHAEKIGADLWLFNRDFNYSGDKQQWNFSGRGRRRNSLG 242

Query: 248 YPSLRGANQLLNASAALAALEALREVLPVGAQEVRTGLATVELPARFQVLPGQPLVILDV 307
           YPSLRGANQLLNAS+ LAALEALR  LPVGAQEVRTGLA V+LP RFQVLPGQP VILDV
Sbjct: 243 YPSLRGANQLLNASSVLAALEALRLRLPVGAQEVRTGLALVDLPGRFQVLPGQPTVILDV 302

Query: 308 AHNPHAAATLAQNLDNMGFHPYTYAVFGSMLDKDIEGVISHLKDKIDHWCVTDLPLPRAA 367
           AHNPHAAATLAQNLDNM F PYTYAVFG+M DKDI+GVISHLK ++DHWCVTDLPLPRAA
Sbjct: 303 AHNPHAAATLAQNLDNMNFAPYTYAVFGAMQDKDIDGVISHLKGRVDHWCVTDLPLPRAA 362

Query: 368 SAQQLKETLLGAGVQPEFRRDAARSIETFTSPAQAYANALSRAGENDRIVVFGSFLTVAG 427
            A ++++ L+ A  +     D+ RSI+TFTSPA+A+ANALSRAGENDRI VFGSFLTVAG
Sbjct: 363 GAAEIRDKLIHAYGEVPPAGDSERSIQTFTSPAEAFANALSRAGENDRIAVFGSFLTVAG 422

Query: 428 VMQARRPGRH 437
           VM+ R    H
Sbjct: 423 VMEFRNSEHH 432


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.136    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 973,704
Number of extensions: 38857
Number of successful extensions: 138
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 138
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 351
Effective length of database: 903,079
Effective search space: 316980729
Effective search space used: 316980729
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)