BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3237.p
         (219 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981966|ref|YP_001352970.1| M50 family peptidase [Janthinob...   305   1e-84

>gi|152981966|ref|YP_001352970.1| M50 family peptidase
           [Janthinobacterium sp. Marseille]
          Length = 218

 Score =  305 bits (782), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 153/218 (70%), Positives = 182/218 (83%), Gaps = 2/218 (0%)

Query: 1   MNDLIQTVAVYALPVLFAITLHEAAHAYAAKFFGDNTAYSMGRMSMNPMKHIDPFGTILI 60
           MNDLIQT +VYALP++FAITLHEAAHAYAAK+FGD TAY+ GRMS+NP+KHIDP GT+LI
Sbjct: 1   MNDLIQTFSVYALPIVFAITLHEAAHAYAAKYFGDTTAYAQGRMSLNPIKHIDPIGTLLI 60

Query: 61  PVLLYFATGGNFLFGYAKPVPINFGHLRKPKRDMAWVALAGPAANFFMAFLWMVAIYALA 120
           P++LYFA G  FLFGYAKPVP+NF +LR PK+ MA+VALAGPAAN  MA +WM+    L 
Sbjct: 61  PIVLYFA-GSPFLFGYAKPVPVNFANLRNPKKQMAFVALAGPAANLVMALMWMLLAVFLH 119

Query: 121 LGGVQEEFFTLMARAGVLTNLVMFAFNLFPIPPLDGGRILTSLLPHKYAYKFAQIEPYGF 180
             G  EEF   MA+AG+LTNLV+FAFNLFPIPPLDGGRI+TSLLP+KYAYKFAQ+EPYGF
Sbjct: 120 AFGSNEEFLMRMAQAGILTNLVIFAFNLFPIPPLDGGRIMTSLLPNKYAYKFAQLEPYGF 179

Query: 181 FIVMALVLLKLIYTWWMAPVMYVAGQLLQLITYPITLL 218
           FIV+ALV LK+++ +WM PVM +A   L L+  PIT L
Sbjct: 180 FIVLALVFLKVLH-FWMVPVMTIAETGLLLLISPITFL 216


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.332    0.145    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 547,853
Number of extensions: 22847
Number of successful extensions: 79
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 77
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 139
Effective length of database: 925,261
Effective search space: 128611279
Effective search space used: 128611279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 127 (53.5 bits)