BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3222.p
         (362 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979887|ref|YP_001352195.1| xanthine and CO dehydrogenases ...   432   e-122

>gi|152979887|ref|YP_001352195.1| xanthine and CO dehydrogenases
           maturation factor [Janthinobacterium sp. Marseille]
          Length = 349

 Score =  432 bits (1112), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/353 (64%), Positives = 258/353 (73%), Gaps = 10/353 (2%)

Query: 1   MTTWLSALRRMQQEAIPAVLVTVAQIQGSTPREPGARMVYSADQQFDTIGGGHLEWRAAQ 60
           M++WL AL+         VLVTVA IQGSTPRE GARMV++A QQFDTIGGGHLEWRAA+
Sbjct: 1   MSSWLEALQAAATRKENCVLVTVAGIQGSTPREEGARMVFTATQQFDTIGGGHLEWRAAE 60

Query: 61  IARAMLDTDAASLPGQRRL---ERIALGPSLGQCCGGVVVLCFERIGADEEALRTWQVLE 117
            ARAML    A    +RRL   ERIALGPSLGQCCGGVV L FE I  DE A      L 
Sbjct: 61  TARAML----ADHDSKRRLTHVERIALGPSLGQCCGGVVFLAFEII--DENAASMLAGLA 114

Query: 118 QSWCRGNDLWRAVPLDQIHAQQLHAIDGRNCQPDVPDHGLPPMDLRDVRQTHLLRDRHGH 177
                G ++WRAVPL+      L+ IDG   + +  D+GL     R    TH+ RD  G 
Sbjct: 115 ACRKDGVNVWRAVPLESSDPSLLYEIDGSCREANTADNGLHAGMFRIASNTHIARDTRGR 174

Query: 178 RWLLDLCRAHQPQVVLFGAGHVGAAIVKVLSTLPCRVLWVDEREDMFPPDLPAQIRIEAT 237
           RWL DLC A  PQVVLFGAGHVG A+V++L  LPCR+LWVDEREDMFP DLP Q+ I+AT
Sbjct: 175 RWLFDLCSARLPQVVLFGAGHVGTALVRMLGMLPCRILWVDEREDMFPSDLPEQVTIDAT 234

Query: 238 DVPNAAVDMAEPGAYYLVMTHSHALDQQLTERILKRQDIAWFGLIGSITKRKQFEHRLAV 297
           DVPNA V  AEPGAY+LVMTHSH+LDQQLTE+IL+R D+AWFGLIGS TKRKQFEHRL  
Sbjct: 235 DVPNAVVAKAEPGAYFLVMTHSHSLDQQLTEQILRRDDVAWFGLIGSHTKRKQFEHRLQD 294

Query: 298 RGFGAAELERITCPIGIPGIYGKEPASIAIAVVAQLMQLWELRLSHPPSKALS 350
           RG    +L ++TCPIGIPGIYGKEPASIA+AVVAQLMQLWELR +H P KAL+
Sbjct: 295 RGITVEQLNKMTCPIGIPGIYGKEPASIAVAVVAQLMQLWELR-AHSPLKALT 346


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 936,104
Number of extensions: 40167
Number of successful extensions: 114
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 278
Effective length of database: 910,473
Effective search space: 253111494
Effective search space used: 253111494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)