BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3219.p
         (433 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981023|ref|YP_001352198.1| uracil/xanthine permease [Janth...   706   0.0  

>gi|152981023|ref|YP_001352198.1| uracil/xanthine permease
           [Janthinobacterium sp. Marseille]
          Length = 431

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/431 (81%), Positives = 391/431 (90%)

Query: 1   MNVLNKFFHLEENGTTVRTELLAGLTTFLTMAYIIFVNPSILGDAGMPKDAVFVATCVAA 60
           M  L KFF L E+GTTVRTELLAGLTTFLTMAYIIFVNP+ILGDAGMPKD+VFVATCVAA
Sbjct: 1   MTFLEKFFKLNEHGTTVRTELLAGLTTFLTMAYIIFVNPAILGDAGMPKDSVFVATCVAA 60

Query: 61  AVGTLIMGLYANYPIGLAPGMGLNAYFAYAVVKGMGFPWQAALGAVLISGCLFLVVSVLR 120
           A+GTLIMGLYANYPIGLAPGMGLNAYF+YAVV GMG+ WQAALGAV ISGCLF++VS+ +
Sbjct: 61  AIGTLIMGLYANYPIGLAPGMGLNAYFSYAVVLGMGYSWQAALGAVFISGCLFMLVSLFK 120

Query: 121 IREVIIKSIPHSLRTAIPAGIGLFLAIISLKSAGIVAANPATFVTLGDLHQPAPVMASIG 180
           IRE+II SIP SLRTAIPAGIGLFL +I+LK+AGIV  NP T +TLGDLHQP  V+A IG
Sbjct: 121 IRELIINSIPVSLRTAIPAGIGLFLGLIALKNAGIVVGNPNTLITLGDLHQPPAVLAIIG 180

Query: 181 FLVIVALDRLKVRGALLIGILLVTVLSFLFGGNHFSGIFAAPPSIAPTFLQLDIKGAISM 240
           F+VIVALDRLKVRGA+LIGIL VTVLSF F GNHF GIF+ PPS++PT   LDI GA+ M
Sbjct: 181 FIVIVALDRLKVRGAMLIGILAVTVLSFFFAGNHFVGIFSTPPSVSPTLFALDIPGALGM 240

Query: 241 GLINVVLVFFLVELFDATGTLMGVATRAGLMKDGKMERLNKALMADSTAIVAGSLLGTSS 300
           GLINVVLVFFLVELFDATGTLMGVA RAGL+K+GK+ERLNKAL+ADS AI+AGS+LGTSS
Sbjct: 241 GLINVVLVFFLVELFDATGTLMGVAQRAGLVKNGKIERLNKALLADSGAIIAGSMLGTSS 300

Query: 301 TTAYIESAAGVQAGGRTGLTAVAIAVLFLLCLFIAPLAGVVPAYATAPALFFVACLMLRE 360
           TTAYIESAAGVQAGGRTGLTAV IA+LFLL LFIAPLAGVVPAYATAPALFFVACLMLRE
Sbjct: 301 TTAYIESAAGVQAGGRTGLTAVTIAILFLLALFIAPLAGVVPAYATAPALFFVACLMLRE 360

Query: 361 LVHIDWNDTTECVPAVITALVMPFTYSIANGLALGFISYAGLKLLTGRMKDVSVVIWIIA 420
           L  IDW DTTEC+PAVIT ++MPFTYS+ANG+ALGFI+YA LKLLTGR ++VS++IWIIA
Sbjct: 361 LRDIDWEDTTECIPAVITTVIMPFTYSVANGMALGFITYAALKLLTGRAREVSIMIWIIA 420

Query: 421 AIFLFKLIYLG 431
           A+FLFKL YLG
Sbjct: 421 ALFLFKLTYLG 431


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.328    0.142    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 963,415
Number of extensions: 40466
Number of successful extensions: 240
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 240
Number of HSP's successfully gapped: 2
Length of query: 433
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 347
Effective length of database: 903,079
Effective search space: 313368413
Effective search space used: 313368413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 131 (55.1 bits)