BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3211.p
         (226 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979871|ref|YP_001355310.1| PiuC iron-regulated protein [Ja...   365   e-102
gi|152980388|ref|YP_001355308.1| PiuC iron-regulated protein [Ja...   332   9e-93

>gi|152979871|ref|YP_001355310.1| PiuC iron-regulated protein
           [Janthinobacterium sp. Marseille]
          Length = 226

 Score =  365 bits (937), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 168/226 (74%), Positives = 195/226 (86%)

Query: 1   MMLHIPEVLSAEQVRHIRAELDRADWVDGRATVGDQGARVKRNRQLPEHSPLGFALGEII 60
           MMLHIPEVL+  QV  IR  LD ADWVDG+ATVG QGA+VK+NRQLPE SP+G  LG+II
Sbjct: 1   MMLHIPEVLTPAQVSEIRQRLDAADWVDGKATVGAQGAQVKKNRQLPELSPVGMELGQII 60

Query: 61  LEALRKNPLFFAAALPKKTMPPLFNSYEGGEHYGLHVDGSVRNLPNAAGSIRTDVSSTLF 120
           L+AL  NPLFFAAALP + MPPLFN YEGGEHYG H+DGSVRN+P +  S+RTD+S TLF
Sbjct: 61  LKALVNNPLFFAAALPMRYMPPLFNRYEGGEHYGFHIDGSVRNIPGSNLSLRTDLSCTLF 120

Query: 121 LCDPDDYEGGELVVVDTYGTHEVKLPAGDLIVYPSTSLHRVEPVTRGARVCAFFWSQSMI 180
           LC+P+DY+GGEL+V DTYG HEVKLPAGD+I+YPS+SLH+VEPVTRGARVC+FFW QSM+
Sbjct: 121 LCEPEDYDGGELIVADTYGEHEVKLPAGDMILYPSSSLHKVEPVTRGARVCSFFWLQSMV 180

Query: 181 RDDWKRSMLFELDRNIYSLRQKIGDTEEVLGLTGHYHNLLRQWAEV 226
            DD KRS+LFELD+NI  LR K+GD EEV+GLTGHYHNLLRQWA V
Sbjct: 181 ADDAKRSLLFELDQNIQKLRAKLGDCEEVVGLTGHYHNLLRQWAAV 226


>gi|152980388|ref|YP_001355308.1| PiuC iron-regulated protein
           [Janthinobacterium sp. Marseille]
          Length = 226

 Score =  332 bits (852), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 153/226 (67%), Positives = 187/226 (82%)

Query: 1   MMLHIPEVLSAEQVRHIRAELDRADWVDGRATVGDQGARVKRNRQLPEHSPLGFALGEII 60
           MMLHIPEVL+A QV  IR  +D A+WVDG+ATVG QGA+VKRNRQLPE S  G  +G+ I
Sbjct: 1   MMLHIPEVLTAAQVVEIRKTIDTAEWVDGKATVGAQGAKVKRNRQLPELSATGLKVGQEI 60

Query: 61  LEALRKNPLFFAAALPKKTMPPLFNSYEGGEHYGLHVDGSVRNLPNAAGSIRTDVSSTLF 120
           L+AL  +PLF +AALP + MPPLFN YEGGEHYG HVDGSVR++P +  S+RTD+S TLF
Sbjct: 61  LKALAGHPLFVSAALPMRYMPPLFNRYEGGEHYGFHVDGSVRSIPGSNLSLRTDLSCTLF 120

Query: 121 LCDPDDYEGGELVVVDTYGTHEVKLPAGDLIVYPSTSLHRVEPVTRGARVCAFFWSQSMI 180
           L +P++YEGGELVV DTYG H VKLPAGD+I+YP++S+H+VEPVT GAR+ +FFW QSM+
Sbjct: 121 LSEPEEYEGGELVVADTYGEHAVKLPAGDMILYPASSVHKVEPVTHGARISSFFWVQSMV 180

Query: 181 RDDWKRSMLFELDRNIYSLRQKIGDTEEVLGLTGHYHNLLRQWAEV 226
            DD KR +LFELD+NI  LR ++GD EE++GLTGHYHNLLRQWA V
Sbjct: 181 ADDGKRGLLFELDQNIQKLRARLGDCEEIIGLTGHYHNLLRQWAMV 226


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 568,063
Number of extensions: 23253
Number of successful extensions: 55
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 55
Number of HSP's successfully gapped: 2
Length of query: 226
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 146
Effective length of database: 925,261
Effective search space: 135088106
Effective search space used: 135088106
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)