BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3186.p
         (247 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980526|ref|YP_001354201.1| leucyl/phenylalanyl-tRNA--prote...   292   1e-80

>gi|152980526|ref|YP_001354201.1| leucyl/phenylalanyl-tRNA--protein
           transferase [Janthinobacterium sp. Marseille]
          Length = 244

 Score =  292 bits (748), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/241 (62%), Positives = 180/241 (74%), Gaps = 4/241 (1%)

Query: 1   MIAWLDLDTPFPDVSRALEDPPGLLAAGADL---SPQRLLEAYRQGIFPWFSEGQPILWW 57
           MI WL+ D PFP VS AL +  G     A     S  RLL+AY+ GIFPWFSEGQPILWW
Sbjct: 1   MIPWLEADDPFPHVSSALTEADGAAGLLAAGADLSTGRLLQAYKHGIFPWFSEGQPILWW 60

Query: 58  STDPRMVLYTDRFVVSDSLKKTLRRVERSRHG-DGLWQVSFDTAFEQVMQGCAGPRRHEH 116
           STDPRMVL+ + F +S SLKK L+++  S    DG W++ FD AFE+VM+ CA PR  E 
Sbjct: 61  STDPRMVLFVENFRISASLKKKLKKIHHSITSRDGQWEIRFDHAFEEVMRACAAPRNGEG 120

Query: 117 GTWISPEIMQGYTGLHRAGFAHSSEVWLNGELVGGAYGVSIGRMFYGESMFARVSDASKV 176
           GTWIS EI+ GYTGLH+ G+AHSSE+WL G+LVG AYGVSIG+MFYGESMFARV DASK+
Sbjct: 121 GTWISDEIIAGYTGLHKLGYAHSSELWLQGKLVGAAYGVSIGQMFYGESMFARVPDASKI 180

Query: 177 ALAHLVFFLHSHGVEMIDCQQETSHLASLGARPIARSDFLRHLRGAIQQPQIRGWTPLNL 236
           ALA+LV FL +H V MIDCQQETSHLA+LGA PIAR++F+  LR A+  PQI  W P+ L
Sbjct: 181 ALAYLVHFLRNHDVSMIDCQQETSHLATLGAAPIARTEFISRLRQAVSGPQISNWQPIAL 240

Query: 237 L 237
            
Sbjct: 241 F 241


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.138    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 632,561
Number of extensions: 25515
Number of successful extensions: 75
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 166
Effective length of database: 921,564
Effective search space: 152979624
Effective search space used: 152979624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 128 (53.9 bits)