BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3149.p
         (322 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982837|ref|YP_001355269.1| proline iminopeptidase chain A ...   337   5e-94

>gi|152982837|ref|YP_001355269.1| proline iminopeptidase chain A
           [Janthinobacterium sp. Marseille]
          Length = 323

 Score =  337 bits (864), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 164/315 (52%), Positives = 209/315 (66%), Gaps = 1/315 (0%)

Query: 5   SNAPLRSLYPPIEPYDHGLLDVGDGHQVYWEVCGNPNGKPVVFLHGGPGGGCGPSHRRLF 64
           ++ P   L+P ++PY  G+L V   H +YWE CGNP G PV+FLHGGPGGG  P HR+ F
Sbjct: 3   ASTPELPLFPELQPYRSGMLPVDARHTLYWEECGNPAGVPVLFLHGGPGGGISPRHRQFF 62

Query: 65  NPEKYRIVLFDQRGCGRSLPHANLEANTTWDLVADIERLRELLGIDRWQVFGGSWGSTLA 124
           NPE YRIVLFDQRG G+S P      NTT  L+ADIE LR +LGI +W VFGGSWG+TLA
Sbjct: 63  NPEYYRIVLFDQRGAGKSTPLGEYRDNTTQLLIADIEALRAMLGIPQWLVFGGSWGATLA 122

Query: 125 LAYAQTHPQRVTELVLRGIFLLRQAELDWYYQEGASWMAPDRWDEFLAPIPVAERGNLVH 184
           LAY QTHP      +LRGIFL  +AE+DW+   G  W  P+    F+A IP  ERG+L+ 
Sbjct: 123 LAYGQTHPHTCLGFILRGIFLCTRAEIDWFLY-GMRWFFPEAHAAFVAAIPPEERGDLLQ 181

Query: 185 AYRKRLTGDDQAAKLQAARAWSRWEASTITLVADERLIDSFNDAQFALAFARIENHYFFN 244
           AY++RL  +D A  LQAAR WSR+E S + L   + +    ND   AL   R+E HYF +
Sbjct: 182 AYKRRLFSEDAAVSLQAARDWSRYEGSCLFLKPPQEIQSMLNDDVIALGVGRLEAHYFLH 241

Query: 245 KGFMEEGQLLTNASRLEGIPGVIVQGRYDLATPAKSAWDLHQAWPGSQLHLIDSAGHAYN 304
           +GFMEE QL+ +  R+  +P VIVQGRYD   P  SA+ LH+AWP ++L ++  AGHA  
Sbjct: 242 QGFMEEDQLIRDIDRIRHLPAVIVQGRYDAVCPPVSAYRLHEAWPQARLQIVGDAGHAAL 301

Query: 305 EPGILDQLIAATDRF 319
           EPG    L+AAT++F
Sbjct: 302 EPGTAAALVAATEQF 316


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.138    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 828,086
Number of extensions: 34825
Number of successful extensions: 88
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 239
Effective length of database: 914,170
Effective search space: 218486630
Effective search space used: 218486630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)