BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3121.p
         (405 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980406|ref|YP_001352937.1| aromatic amino acid aminotransf...   691   0.0  

>gi|152980406|ref|YP_001352937.1| aromatic amino acid
           aminotransferase [Janthinobacterium sp. Marseille]
          Length = 404

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/405 (81%), Positives = 362/405 (89%), Gaps = 1/405 (0%)

Query: 1   MNAPVSASLFSAIEMAPRDPILGVTEAYNADQNPAKTNLGVGVYYDDNGKVPLLECVKKA 60
           MNAP+ ASL +AIEMAPRDPILG+TEA+NAD+NP K NLGVGVY DDNGK+PLLECV+KA
Sbjct: 1   MNAPLPASLLNAIEMAPRDPILGITEAFNADKNPNKINLGVGVYNDDNGKLPLLECVRKA 60

Query: 61  EAELAAKLAPRTYLPIDGLATYDRAVQELVFGTGSAVVTEKRAITVQALGGTGALKLGAD 120
           E  LA KL+PR YLPIDGLA YD+AVQELVFG  SAVV EKRA+T QA+GGTGALKLGAD
Sbjct: 61  EVLLAEKLSPRGYLPIDGLAAYDKAVQELVFGADSAVVKEKRAVTAQAIGGTGALKLGAD 120

Query: 121 FLKHFSPTGTEVWISDPSWENHRALFEMAGFKVNAYPYYDPATRGVNFAGMLDALKTMKT 180
           FLK F+P   +VWISDPSWENHRALFE AGF VN YPYYD ATRGVNFAGMLD LK++ +
Sbjct: 121 FLKRFAPN-AQVWISDPSWENHRALFESAGFVVNNYPYYDAATRGVNFAGMLDTLKSIPS 179

Query: 181 GSVVLLHACCHNPTGADLTADQWTQVIEVVTSRGLIPFLDMAYQGFGDGIAEDGQVVRRF 240
           GS+VLLHACCHNPTGADLT  QW QVIEVV  RGLIPFLDMAYQGFGDGI  DG+VVR+F
Sbjct: 180 GSIVLLHACCHNPTGADLTDAQWAQVIEVVLKRGLIPFLDMAYQGFGDGIESDGKVVRQF 239

Query: 241 AEAGGPLFVSNSFSKSFSLYGERVGALSIAAASAEEAARVLSQLKRVVRTNYSNPPIHGG 300
           AEAGGP+FVSNSFSKSFSLYGERVGALSI A SAEEAARVLSQLKRV+RTNYSNPPIHGG
Sbjct: 240 AEAGGPVFVSNSFSKSFSLYGERVGALSIVAVSAEEAARVLSQLKRVIRTNYSNPPIHGG 299

Query: 301 QVVATALASPELRKLWEDELAEMRVRIREMRHLLVAKLKEKAPGHDFDFVIKQRGMFSYS 360
           QVVATALA+PELR LWE+ELA MRVRIR+MR   V KLKE+AP H+FDFVI+QRGMFSYS
Sbjct: 300 QVVATALATPELRALWEEELAGMRVRIRDMRQAFVQKLKEQAPAHNFDFVIQQRGMFSYS 359

Query: 361 GLTKAQVDRLRNEFSIYAVDTGRICVAALNTKNIDVVVDAIAKVL 405
           GLTK QV+RLR+E+SIYA+DTGRICVAALNT+NID VV AIAKV+
Sbjct: 360 GLTKEQVNRLRDEYSIYAIDTGRICVAALNTRNIDYVVGAIAKVI 404


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 886,577
Number of extensions: 34117
Number of successful extensions: 98
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 320
Effective length of database: 906,776
Effective search space: 290168320
Effective search space used: 290168320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)