BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3098.p
         (153 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980622|ref|YP_001352766.1| hypothetical protein mma_1076 [...   224   1e-60
gi|152982292|ref|YP_001354228.1| hypothetical protein mma_2538 [...    90   7e-20
gi|152982263|ref|YP_001352144.1| hypothetical protein mma_0454 [...    75   2e-15

>gi|152980622|ref|YP_001352766.1| hypothetical protein mma_1076
           [Janthinobacterium sp. Marseille]
          Length = 154

 Score =  224 bits (572), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 102/148 (68%), Positives = 121/148 (81%)

Query: 6   ILATATQRATEGQLPYAGAVTPQEALALIQADPAVKLVDVRTRAERDWVGVVQIPAAQHL 65
           ILA A QR  +  LPYAGA+TPQEA AL+Q+DP VKLVDVRT AERDW+G V IPA QHL
Sbjct: 7   ILAAAQQRGKDNALPYAGALTPQEAYALLQSDPNVKLVDVRTNAERDWIGRVAIPAEQHL 66

Query: 66  AVQWNLYPEGKPNPQFLEQLREVAAPQDIVLFLCRSGVRSKHAAKLASEHGYSRCFDILE 125
           AV+WN+YP G PNP+FL QL+  A+   ++LFLCR  VRS+HAAKLA+E+G+++ FDILE
Sbjct: 67  AVEWNVYPGGTPNPEFLPQLKNAASKDTVLLFLCRGAVRSRHAAKLATENGFAQSFDILE 126

Query: 126 GFEGNKDAAGHRKTVEGWCKAGLPWVGA 153
           GFEG KDA GHRK V GWCKAGLPW+GA
Sbjct: 127 GFEGEKDADGHRKNVNGWCKAGLPWIGA 154


>gi|152982292|ref|YP_001354228.1| hypothetical protein mma_2538
           [Janthinobacterium sp. Marseille]
          Length = 228

 Score = 89.7 bits (221), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 71/129 (55%), Gaps = 5/129 (3%)

Query: 25  VTPQEALALIQADPAVKLVDVRTRAERDWVGVVQIPAAQHLAVQWNLYPEGKPNPQFLEQ 84
           VTPQ A  L  +  AV LVDVRT  ER +VG V  P + H+A  W        NP+F+ +
Sbjct: 105 VTPQLAWQLFSSGKAV-LVDVRTAEERAFVGYV--PDSIHVA--WATGTSLTRNPRFVRE 159

Query: 85  LREVAAPQDIVLFLCRSGVRSKHAAKLASEHGYSRCFDILEGFEGNKDAAGHRKTVEGWC 144
           L         +L LCRSG RS  AA  A + G++R F++LEGFEG  D   HR   +GW 
Sbjct: 160 LEAKTGKDKTILLLCRSGKRSALAADAAQKAGFTRVFNVLEGFEGELDEQQHRGVNDGWR 219

Query: 145 KAGLPWVGA 153
              LPWV A
Sbjct: 220 YHQLPWVQA 228


>gi|152982263|ref|YP_001352144.1| hypothetical protein mma_0454
           [Janthinobacterium sp. Marseille]
          Length = 194

 Score = 75.1 bits (183), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 26/163 (15%)

Query: 10  ATQRATEGQLPYAGAVTPQEALALIQ--ADPAVKLVDVRTRAERDWVGVVQIPAAQHLAV 67
           ATQ     Q   A  +  +EA AL Q  AD A   VDVRTRAE  +VG+  I  A   ++
Sbjct: 22  ATQVPDIKQTKAALYLDAKEAYALKQKMADKAY-FVDVRTRAEISYVGMSTIVDA---SI 77

Query: 68  QWNLYPEGKP------------NPQFLEQL--REVAA---PQDIVLFLCRSGVRSKHAAK 110
            +  +P+  P            N  F  +L  R  AA     D V+ +CRSG RS  AA 
Sbjct: 78  PYVEHPDDAPWDDKNGRFKLDVNSDFGPELARRMTAAGLGKSDTVILICRSGDRSSRAAN 137

Query: 111 LASEHGYSRCFDILEGFEGNKDAAG---HRKTVEGWCKAGLPW 150
           L ++ GY++ + +++GFEG+    G    ++ V GW  AGLPW
Sbjct: 138 LLTDLGYTKVYTVVDGFEGDLAKTGPQAGQRVVNGWKNAGLPW 180


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.133    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 375,684
Number of extensions: 14411
Number of successful extensions: 36
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 33
Number of HSP's successfully gapped: 3
Length of query: 153
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 77
Effective length of database: 940,049
Effective search space: 72383773
Effective search space used: 72383773
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)