BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3084.p
         (296 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981126|ref|YP_001355177.1| carboxyvinyl-carboxyphosphonate...   182   2e-47
gi|152980416|ref|YP_001353633.1| isocitrate lyase [Janthinobacte...    82   4e-17

>gi|152981126|ref|YP_001355177.1| carboxyvinyl-carboxyphosphonate
           phosphorylmutase [Janthinobacterium sp. Marseille]
          Length = 293

 Score =  182 bits (463), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/280 (38%), Positives = 155/280 (55%), Gaps = 6/280 (2%)

Query: 10  FRQAVKEESPLQVIGAINANHALLAKRAGFRAIYLSGGGVAAGSLGLPDLGISSLDDVLT 69
            R  V     L V GA NA  A +    GF A+Y++G GV     G+PD G   L+++  
Sbjct: 12  LRDKVYARRGLLVPGAFNALSARVIADLGFEALYITGAGVTNMYFGMPDQGFIGLNELAD 71

Query: 70  DVRRITDVCDLPLLVDVDTGFGASAFNVARTVKSMIKFGAAAMHIEDQVGAKRCGHRPNK 129
              RI D  D+P++VD DTGFG +A NV  T++++ + GA A+ +EDQ+  KRCGH   K
Sbjct: 72  HTARIRDAVDIPIIVDADTGFG-NALNVRHTIRTLERAGADAVQLEDQISPKRCGHFNGK 130

Query: 130 EIVSKQEMVDRIKAAVDARTDDNFVIMARTDALAVEGLEAAVERAVACVEAGADMIFPEA 189
           E++S  EMV +I AAVDAR+D   +IMARTDA +V G E A+ERA    EAGAD++F EA
Sbjct: 131 EVISCAEMVGKIHAAVDARSDAGMLIMARTDARSVHGFEDALERAARYSEAGADILFVEA 190

Query: 190 ITDLAMYQQFAHAVKVPILANITEFGSTPLFTVEELKGADVGLVLYPLSAFR----AMNK 245
                  ++   A+  P L N+   G TP+F+  EL G   G+VLY  +A +     M K
Sbjct: 191 TETADEIRRLPQALDKPQLVNLVIGGKTPIFSANELAGLGYGIVLYANAALQGAVAGMQK 250

Query: 246 AAENVYQAIRRDGTQKNVVDTMQTRMELYDRIDYHSYEQR 285
           A   V +   R     ++V     R  L ++  +   E++
Sbjct: 251 AL-TVLRDTHRLDEDPSLVSPFSERQRLVNKPFFDQLEKK 289


>gi|152980416|ref|YP_001353633.1| isocitrate lyase
           [Janthinobacterium sp. Marseille]
          Length = 440

 Score = 82.0 bits (201), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 129/312 (41%), Gaps = 78/312 (25%)

Query: 17  ESPLQVIGAINANHALLAKRAGFRAIYLSGGGVA-----AGSLGLPDLGISSLDDVLTDV 71
           E  +  +GA+  N A+   +AG +AIYLSG  VA     AG +  PD  +   + V   V
Sbjct: 61  EPFVNSLGALTGNQAMQQVKAGLKAIYLSGWQVAGDANVAGEM-YPDQSLYPANSVPLVV 119

Query: 72  RRITDV--C-----------DL----PLLVDVDTGFGASAFNVARTVKSMIKFGAAAMHI 114
           +RI +   C           DL    P++ D + GFG    N    +K+MI+ GAA +H 
Sbjct: 120 KRINNTFQCADQIQWSEGKGDLDFFAPIVADAEAGFGG-VLNAYELMKAMIEAGAAGVHF 178

Query: 115 EDQVGA-KRCGHRPNKEIVSKQEMVDRIKAA------VDARTDDNFVIMARTDALAVE-- 165
           EDQ+ + K+CGH   K +V  +E V+++ AA         RT    +++ARTDA A +  
Sbjct: 179 EDQLASVKKCGHMGGKVLVPTREAVEKLNAARLAADVCGTRT----LVIARTDAEAADLL 234

Query: 166 --------------------------GLEAAVERAVACVEAGADMIFPE-AITDLAMYQQ 198
                                     G + AV R +A      DM++ E    DL   +Q
Sbjct: 235 TSDVDANDKPFLTGERTVEGFYKTRAGFDQAVSRGLAYAPY-VDMLWCETGKPDLEFARQ 293

Query: 199 FAHAVKVPILANITEFGSTPLFTV-------------EELKGADVGLVLYPLSAFRAMNK 245
           FA A+       +  +  +P F               +EL           L+ F ++N 
Sbjct: 294 FADAIHAKFPGKMLAYNCSPSFNWRKNLDDATIAKFQKELGAMGYKFQFITLAGFHSLNY 353

Query: 246 AAENVYQAIRRD 257
           +  N+     R+
Sbjct: 354 SMFNLAHGYARN 365


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.134    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 501,591
Number of extensions: 15867
Number of successful extensions: 57
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 2
Length of query: 296
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 213
Effective length of database: 914,170
Effective search space: 194718210
Effective search space used: 194718210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)