BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3080.p
         (167 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981583|ref|YP_001354135.1| phosphinothricin N-acetyltransf...   216   5e-58
gi|152979862|ref|YP_001353673.1| acetyltransferase [Janthinobact...    82   2e-17

>gi|152981583|ref|YP_001354135.1| phosphinothricin
           N-acetyltransferase [Janthinobacterium sp. Marseille]
          Length = 173

 Score =  216 bits (550), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 104/164 (63%), Positives = 120/164 (73%)

Query: 1   MQPSIRPATAADAAALCGIYNHYVQTTVISFETEAVSVEAMAARIAEVQAQFPWLVFEEN 60
           M  +IR AT  DAAA+C IYNHYV  TVISFE EAVS + MA RI E   QFPWLV+E +
Sbjct: 1   MSDAIRLATVNDAAAICHIYNHYVLNTVISFEMEAVSADEMALRIEETLQQFPWLVYEAD 60

Query: 61  GEVLGYAYASKWKPRAAYQHSVESSVYLRHDAGGRGIGKQLYRALIARLKPLGVHLVIGG 120
           G +LGYAYASKWK R AYQHSVE SVYL  D+GG+G+G  LY+ALIA L    VH V+GG
Sbjct: 61  GRILGYAYASKWKVRKAYQHSVEGSVYLGQDSGGKGLGTLLYKALIAELAKQSVHAVLGG 120

Query: 121 IAQPNPASVALHESVGFVKCGVFTEVGYKMGRWIDVGYWQLKLQ 164
           I  PNP SVALHE +GFVK     ++G K  +W+DVGYWQL LQ
Sbjct: 121 IVLPNPGSVALHEKLGFVKVAHLPQIGKKFDQWLDVGYWQLILQ 164


>gi|152979862|ref|YP_001353673.1| acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 165

 Score = 81.6 bits (200), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 72/138 (52%), Gaps = 1/138 (0%)

Query: 1   MQPSIRPATAADAAALCGIYNHYVQTTVISFETEAVSVEAMAARIAEVQA-QFPWLVFEE 59
           M    R AT  D  A+  IYN  + +  ++ + E V+V +  A   E  A Q P  V EE
Sbjct: 1   MSLPYRLATLDDLPAIVAIYNSTIASRQVTADIEPVTVASRQAWFLEHTAGQRPIWVLEE 60

Query: 60  NGEVLGYAYASKWKPRAAYQHSVESSVYLRHDAGGRGIGKQLYRALIARLKPLGVHLVIG 119
            G VLG+   S +  RAAY  +VE S+YL  DA G+G+G  L +  IA    LG+H ++G
Sbjct: 61  QGRVLGWLSYSNFHARAAYAATVELSIYLHEDARGKGLGAYLLQEAIAYAPKLGIHTLVG 120

Query: 120 GIAQPNPASVALHESVGF 137
            I   N  S+ L E  GF
Sbjct: 121 LIFGHNTPSLKLFERFGF 138


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 402,712
Number of extensions: 15335
Number of successful extensions: 40
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 2
Length of query: 167
Length of database: 1,221,021
Length adjustment: 77
Effective length of query: 90
Effective length of database: 936,352
Effective search space: 84271680
Effective search space used: 84271680
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)