BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3072.p
         (376 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981611|ref|YP_001354150.1| hypothetical protein mma_2460 [...   461   e-131

>gi|152981611|ref|YP_001354150.1| hypothetical protein mma_2460
           [Janthinobacterium sp. Marseille]
          Length = 376

 Score =  461 bits (1185), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/376 (59%), Positives = 297/376 (78%), Gaps = 1/376 (0%)

Query: 1   MIFQRALRRELTSTAGGVFTTLFTITLTVMLIKILGQAAGGQVASQDVLALIGFQSLNYM 60
           MIFQRALRR+L STAG VFTTLFTIT+TV LI+ILGQAAGG++AS DV+AL+GF +LNY+
Sbjct: 1   MIFQRALRRDLLSTAGAVFTTLFTITITVTLIRILGQAAGGKIASSDVVALLGFSALNYL 60

Query: 61  PIILILTGFISVLLVMTRSYQDSEIVVWFSCGMSLTRWITPVLRFGWPIMALVAVLSFVV 120
           PI+L LTGF++VLLV+TRSYQDSE+VVWF+ G+SL +WI PVL FG PI+ L AVLS  +
Sbjct: 61  PILLNLTGFVAVLLVVTRSYQDSEMVVWFASGLSLAKWIQPVLMFGLPIVTLTAVLSLFL 120

Query: 121 TPWANEQSSEYRSRFEQREDIARVSPGKFQESAAANRIFFVEGISGDASKVRNIFVNTIN 180
           TPW+NEQS+ Y+ R+  REDIARVSPGKFQES++++R+FFVEG+SGD++KV+NIFV+++ 
Sbjct: 121 TPWSNEQSAVYKERYANREDIARVSPGKFQESSSSDRVFFVEGVSGDSTKVKNIFVSSV- 179

Query: 181 QDGKNSVVVAKEGETTVDADGEKFVVMQKGRRYDGSPSLPDFQIVDFERYGLLIGNQSQT 240
            +GK SVVVAKEG   +D  G+KF+VM +GRRYDG P+  DF++++F+RYG+L+  QS+ 
Sbjct: 180 LNGKTSVVVAKEGTVEIDQAGDKFLVMHQGRRYDGIPTQSDFELMEFDRYGVLVATQSKA 239

Query: 241 AAGERSARALQMNELLAKRDGFARGELLWRIALPLMALALMLLAIPLSFVNPRAGRSLGL 300
             G+ SARA    ELL+ R+ F  GE+LWR++LPLM + LMLLAIPL FVNPR GRS  L
Sbjct: 240 LVGDTSARATSTKELLSNRNNFNDGEILWRVSLPLMGILLMLLAIPLGFVNPRGGRSANL 299

Query: 301 LVALLLFVVYSNTVSVFQASVAQQRMSFVMAWWPVHLIVALLIVGMFALRLNINHPFHPS 360
           L+AL LFV YSN +S  QA+V Q R + ++AWWPVHL+  +++   F  RL +N  +HP 
Sbjct: 300 LIALFLFVFYSNMLSFAQATVVQNRSTLMLAWWPVHLVALIVVAVFFTWRLKVNSRYHPL 359

Query: 361 RLWSRVRRAMTFQREA 376
             WS ++R    ++ A
Sbjct: 360 VAWSLLKRTCLSRKAA 375


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.326    0.138    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 708,043
Number of extensions: 25361
Number of successful extensions: 99
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 291
Effective length of database: 906,776
Effective search space: 263871816
Effective search space used: 263871816
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 130 (54.7 bits)