BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3069.p
         (253 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980720|ref|YP_001354147.1| uroporphyrin-III C-methyltransf...   297   4e-82
gi|152980308|ref|YP_001352177.1| uroporphyrin-III C-methyltransf...   122   2e-29

>gi|152980720|ref|YP_001354147.1| uroporphyrin-III
           C-methyltransferase [Janthinobacterium sp. Marseille]
          Length = 239

 Score =  297 bits (761), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/231 (64%), Positives = 185/231 (80%)

Query: 23  GMVWLVGSGPGAADLLTVRAARLLAQAEIVLHDALVTPDILALCPQAVLVSVGKRSGQRS 82
           G V+L+G+GPGA DL+TVR AR+LAQA++VLHDALVTP++L LCPQA  +SVGKRSGQRS
Sbjct: 9   GKVYLIGAGPGAVDLITVRGARILAQADVVLHDALVTPEMLELCPQAEKISVGKRSGQRS 68

Query: 83  TAQPVINQKLVEAAQQYRRVVRLKGGDPMLFGRADEEMRALEEHNIPFEIVPGITAALAA 142
           TAQ  INQ LV+ A +Y+ +VRLKGGDPMLFGRADEE+ ALE H I  EIVPGIT A AA
Sbjct: 69  TAQLAINQLLVDCAAKYKLIVRLKGGDPMLFGRADEELHALEAHGIEIEIVPGITTAFAA 128

Query: 143 ASAAKRPLTRRGIARSVSLFTSSTGVDEPNEVRMPNGDTLVQYMGGREATATAQRLLALG 202
           A+AA+ PLT+RGIARS++ FTS+T  ++P+++ +P+ DTL+QYMGGREA  TAQ+LL  G
Sbjct: 129 AAAAQLPLTKRGIARSIAFFTSATAPNQPDQLTLPDCDTLIQYMGGREAMVTAQKLLEQG 188

Query: 203 HAPETPVVVVENCSRADQHIYHLQLAGLEAGLQACSGPVLVMIGPALADRN 253
            +P+ PVV+VENCS  +Q I  + L  LE GLQ   GPVLVMIG ALA R 
Sbjct: 189 RSPDLPVVIVENCSLPNQKIVRMNLRELERGLQDTQGPVLVMIGAALAARQ 239


>gi|152980308|ref|YP_001352177.1| uroporphyrin-III
           C-methyltransferase [Janthinobacterium sp. Marseille]
          Length = 270

 Score =  122 bits (307), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 122/234 (52%), Gaps = 8/234 (3%)

Query: 20  EHPGMVWLVGSGPGAADLLTVRAARLLAQAEIVLHDALVTPDILALCP-QAVLVSVGKRS 78
           E    V+LVG+GPG  DLLT++A + +  A+++L D LV P++L   P  A +V+VGKR 
Sbjct: 10  EQAAKVFLVGAGPGDPDLLTIKAVKAIGCADVILIDDLVNPEVLQYAPATARIVNVGKRG 69

Query: 79  GQRSTAQPVINQKLVEAAQQYRRVVRLKGGDPMLFGRADEEMRALEEHNIPFEIVPGITA 138
           G + T Q  I + ++  AQ    VVRLKGGDP +FGR  EE   L+   I  E++ GI++
Sbjct: 70  GCQQTPQEFIERLMLSEAQAGHCVVRLKGGDPFIFGRGGEEREHLQAAGIVVEVINGISS 129

Query: 139 ALAAASAAKRPLTRRGIARSVSLFTSSTGVDEPN---EVRMPNGDTLVQYMGGREATATA 195
            LAA ++   PLT R  ++     T      E N   E       TLV YMG        
Sbjct: 130 GLAAPASIGVPLTHRDWSQGAIFITGHGKNAESNPDWETLAKLKLTLVIYMGIARCAEIQ 189

Query: 196 QRLLALGHAPETPVVVVENCSRADQHIYHLQLAGLEAGLQACSG---PVLVMIG 246
             LLA G    TPV V+++ +   Q      L+ L   L A SG   P +++IG
Sbjct: 190 SALLAGGKDGTTPVAVIQSATGMAQAQLITTLSDLPQAL-AGSGIGSPAIIVIG 242


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.131    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 534,913
Number of extensions: 19654
Number of successful extensions: 74
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 2
Length of query: 253
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 172
Effective length of database: 921,564
Effective search space: 158509008
Effective search space used: 158509008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)