BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3052.p
         (175 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982144|ref|YP_001352798.1| hypothetical protein mma_1108 [...   174   2e-45
gi|152982730|ref|YP_001353147.1| hypothetical protein mma_1457 [...    66   1e-12

>gi|152982144|ref|YP_001352798.1| hypothetical protein mma_1108
           [Janthinobacterium sp. Marseille]
          Length = 159

 Score =  174 bits (442), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/155 (54%), Positives = 111/155 (71%), Gaps = 6/155 (3%)

Query: 18  AFLVALAMFGCDRNGNPIEEFGLDKLQKGISSEADVRGVMGQPDTVWEDGGGARTLEYPK 77
            F  +L M GC ++     EFGL+KL KG+S+EADVR  MG+P+ VWE+  G+RTLEYPK
Sbjct: 6   GFFCSLLMLGCQQS-----EFGLEKLTKGVSTEADVRSAMGEPEIVWEEHNGSRTLEYPK 60

Query: 78  GPEGIRTWMFAIGASGTLIDYRQVLTQEHFDTIRAGMTADQIRREFGRPRSVVQFARKNE 137
           GP G RT+M  I A G L DY QVLT ++F TI+ GMT +++RR+ G+PR+V +F  KNE
Sbjct: 61  GPAGHRTYMVDIDAQGKLRDYTQVLTNDNFATIKVGMTREEVRRKLGKPRTVGKFNLKNE 120

Query: 138 EVWDWKY-HYVHEDRLFNVHFDMNTRQVVRTSISE 171
           EVWDW+Y      +R FNVHFD+ T +V RTS+S+
Sbjct: 121 EVWDWRYLEGPSIERFFNVHFDLETGKVTRTSVSD 155


>gi|152982730|ref|YP_001353147.1| hypothetical protein mma_1457
           [Janthinobacterium sp. Marseille]
          Length = 169

 Score = 66.2 bits (160), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 50  EADVRGVMGQPDTVWEDGGGARTLEYPKGPEGIRTWMFAIGASGTLIDYRQVLTQEHFDT 109
           EA V   +G+P +  ED  G   LEY + P G  T M     SG L+ Y QVLT E F T
Sbjct: 33  EASVVAKLGRPTSRIEDRNG-YLLEYTRNPWGQATDMARFDRSGNLVSYEQVLTVEKFAT 91

Query: 110 IRAGM-TADQIRREFGRPRSVVQFARKNEEVWDWKYHYVHE-DRLFNVHFDMN 160
           I+ G+ T D + R  G P      +R   EVW + Y      + + +VHFD N
Sbjct: 92  IKPGIATKDDVLRTIGHPSETSYLSRLQLEVWSYPYKEAGVWNSVMHVHFDNN 144


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.139    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 434,463
Number of extensions: 18622
Number of successful extensions: 45
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 43
Number of HSP's successfully gapped: 2
Length of query: 175
Length of database: 1,221,021
Length adjustment: 77
Effective length of query: 98
Effective length of database: 936,352
Effective search space: 91762496
Effective search space used: 91762496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)