BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.3044.p
         (362 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980694|ref|YP_001353666.1| Mrp protein [Janthinobacterium ...   589   e-169

>gi|152980694|ref|YP_001353666.1| Mrp protein [Janthinobacterium sp.
           Marseille]
          Length = 362

 Score =  589 bits (1518), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 288/362 (79%), Positives = 324/362 (89%)

Query: 1   MSITVEEIKAALLQVIDPNTGRDLIRGKEARNIRVEGGRVLLDVELGYPAASQIAAMRQL 60
           MSIT+E +K AL  VIDPNTG+DL+  + A+NI++ G  V+ DVELGYPA SQI  +R+ 
Sbjct: 1   MSITIEAVKEALTAVIDPNTGKDLVSSRSAKNIQINGNNVIFDVELGYPAKSQIDGIRKA 60

Query: 61  VEAALGKLPGVTGVEANVTFKIVAHAVQRGIKLKSNVKNIIAVASGKGGVGKSTTAVNLA 120
             AA+  + G+  V ANV  KIVAH+ QRG+KL +NVKNIIAVASGKGGVGKSTT+VNLA
Sbjct: 61  SIAAVRTIEGMGSVTANVHSKIVAHSAQRGVKLMANVKNIIAVASGKGGVGKSTTSVNLA 120

Query: 121 LALAAEGARVGILDADIYGPSQPMMMGISGQPETRDGKTMEPLENHGLQVSSIGFMIDPD 180
           LALAAEGA+VGILDADIYGPSQPMMMGISG+PET DGKTMEP+EN+GLQVSSIGFMIDPD
Sbjct: 121 LALAAEGAQVGILDADIYGPSQPMMMGISGRPETMDGKTMEPMENYGLQVSSIGFMIDPD 180

Query: 181 EPMVWRGPIVTQALQQLLDQTNWRDLDYLIVDMPPGTGDVQLTLSQKVPVTGAVIVTTPQ 240
           EPMVWRGPIVTQAL QLL+QTNWRDLDYLIVDMPPGTGD+QLT+SQKVPVTGAVIVTTPQ
Sbjct: 181 EPMVWRGPIVTQALSQLLEQTNWRDLDYLIVDMPPGTGDIQLTMSQKVPVTGAVIVTTPQ 240

Query: 241 DIALLDARKGLRMFEKVGIPILGIVENMSMHVCSNCGHAEPIFGVGGGEKMCADFGVDFL 300
           DIALLDARKGL+MFEKVGIPILGIVENMS H+CSNCGHAE IFG GGGEKMC ++GVDFL
Sbjct: 241 DIALLDARKGLKMFEKVGIPILGIVENMSTHICSNCGHAEAIFGEGGGEKMCGEYGVDFL 300

Query: 301 GALPLTMQIRQQTDSGKPTVVADPEGKVAEIYKAIARKVAVKVAEKARDMSSKFPSIVVQ 360
           GALPLTM IRQQ DSGKPTVVADP+G +A IYK IARK+A+KVAEKA+DMSSKFP+IVV+
Sbjct: 301 GALPLTMSIRQQADSGKPTVVADPDGPIAVIYKQIARKIAIKVAEKAKDMSSKFPTIVVK 360

Query: 361 ND 362
           ND
Sbjct: 361 ND 362


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.136    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 830,545
Number of extensions: 35427
Number of successful extensions: 142
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 142
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 278
Effective length of database: 910,473
Effective search space: 253111494
Effective search space used: 253111494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)