BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2992.p
         (294 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980061|ref|YP_001353097.1| phosphoserine phosphatase [Jant...   390   e-110

>gi|152980061|ref|YP_001353097.1| phosphoserine phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 280

 Score =  390 bits (1002), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/289 (70%), Positives = 234/289 (80%), Gaps = 13/289 (4%)

Query: 7   MNLILQ--APKQHTVSSSAIDAIAALAGGRAERLADERVPDVDAWRVAGVRGDDALKASI 64
           MNLILQ  + ++H V     + IA LA  R+     E      A+R   +  +D +K+ I
Sbjct: 1   MNLILQGLSTQRHIV-----EQIAGLARPRSIVAIGEH-----AYRCLDISYNDEVKSQI 50

Query: 65  DAACLQARLDYAFIEEGRKLSDFRLLAMDMDSTLITIECIDEIADMQGLKPQVAEITEAA 124
           D A   ARLDYAFIE  R L+DF+L+AMDMDSTLITIECIDEIADMQGLKPQVAEITEAA
Sbjct: 51  DIAAWAARLDYAFIER-RPLADFKLVAMDMDSTLITIECIDEIADMQGLKPQVAEITEAA 109

Query: 125 MRGEIEFNESLTRRVALLQGLDAGALQRVYDERLQLSLGAENMLKAVQAAGLKTLLVSGG 184
           MRGE+EF ESLTRRVALL+GLDAGALQRVYDERLQLS GAENML A+QAAG+K+LLVSGG
Sbjct: 110 MRGELEFKESLTRRVALLKGLDAGALQRVYDERLQLSPGAENMLAAMQAAGMKSLLVSGG 169

Query: 185 FTFFTDRMKARLGLDYTHANTLEVVDGKLTGKVVGGIVNADEKRATVERVCREISAEPAQ 244
           FT+FTDRMK RL LDYTH+N LE+VDGKLTGKV+GGIV+ +EK+ TVERVCR++     Q
Sbjct: 170 FTYFTDRMKQRLQLDYTHSNQLEIVDGKLTGKVIGGIVDGEEKKLTVERVCRDMGISAKQ 229

Query: 245 AIVMGDGANDLRMMGISGLSVAFRAKPVVRAQASVGLNFVGLDGILNLL 293
            IVMGDGANDL+MMGI+GLSVAFRAKPVVRAQA + LNFVGLDG+LNL 
Sbjct: 230 CIVMGDGANDLKMMGIAGLSVAFRAKPVVRAQADIALNFVGLDGVLNLF 278


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.135    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 549,894
Number of extensions: 20234
Number of successful extensions: 102
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 211
Effective length of database: 914,170
Effective search space: 192889870
Effective search space used: 192889870
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)