BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2962.p
         (171 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982532|ref|YP_001353790.1| hypothetical protein mma_2100 [...   205   1e-54

>gi|152982532|ref|YP_001353790.1| hypothetical protein mma_2100
           [Janthinobacterium sp. Marseille]
          Length = 266

 Score =  205 bits (522), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/155 (64%), Positives = 117/155 (75%)

Query: 17  FWSTFRSQVPFYPSGQRAWDAVAALLPQDRAIRFMDIGSGLGGAVLDLSRRRPESEFTGI 76
           +WSTFR+QVP+YPS    W AV  LLP ++ I F+DIGSGLGG V+ L+RRRPES F GI
Sbjct: 112 YWSTFRTQVPYYPSRLTTWQAVEGLLPPEQKISFIDIGSGLGGLVMSLARRRPESRFVGI 171

Query: 77  EIAPLPWLVSRLRAALAGNRCRFVRGDYLLLDFGDYDVVFAYLSPAAMVALWHKARAEMK 136
           EIAPLPWL+S LRA    +   F RGDY  L+F DYDVVFAYLSPAAM  LW KA+AEM+
Sbjct: 172 EIAPLPWLISSLRARFGASGAHFERGDYGRLNFADYDVVFAYLSPAAMPNLWRKAKAEMR 231

Query: 137 PGTLLLSYEFHIPGTTPDVVIDAPGGGPVLHGWRM 171
            GTLLLSYEF IPGTTPD+V+     G  L+GWR+
Sbjct: 232 SGTLLLSYEFIIPGTTPDIVLSPDASGVQLYGWRI 266


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.328    0.145    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 387,128
Number of extensions: 14207
Number of successful extensions: 68
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 1,221,021
Length adjustment: 77
Effective length of query: 94
Effective length of database: 936,352
Effective search space: 88017088
Effective search space used: 88017088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 126 (53.1 bits)