BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2945.p
         (94 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152983241|ref|YP_001353200.1| hypothetical protein mma_1510 [...    85   1e-18

>gi|152983241|ref|YP_001353200.1| hypothetical protein mma_1510
          [Janthinobacterium sp. Marseille]
          Length = 89

 Score = 84.7 bits (208), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 67/85 (78%)

Query: 10 HQDDPAKRARLRWRARRGLLENDLILTRYLDAHEAEMSDDEVDAFSRLMDLTDNDLMDLL 69
          HQ DP KRARLRWR RRGLLENDL+LTR+LD HE  ++D+EV+AFS L++L DN+L++LL
Sbjct: 5  HQADPVKRARLRWRGRRGLLENDLLLTRFLDQHEETLTDEEVEAFSILLELPDNELLNLL 64

Query: 70 LARKEPEAAVDLPQVHALLKTLRTA 94
          LAR EPE   D+P V ALL  LR  
Sbjct: 65 LARNEPEGEADVPHVRALLTRLRAV 89


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.133    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 136,803
Number of extensions: 3050
Number of successful extensions: 10
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 94
Length of database: 1,221,021
Length adjustment: 63
Effective length of query: 31
Effective length of database: 988,110
Effective search space: 30631410
Effective search space used: 30631410
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 122 (51.6 bits)