BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2915.p
         (437 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980326|ref|YP_001353807.1| adenylosuccinate synthetase [Ja...   799   0.0  
gi|152980837|ref|YP_001354008.1| adenylosuccinate synthase [Jant...   175   4e-45

>gi|152980326|ref|YP_001353807.1| adenylosuccinate synthetase
           [Janthinobacterium sp. Marseille]
          Length = 437

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/437 (88%), Positives = 408/437 (93%)

Query: 1   MLQNSNAKNVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGKKTALQL 60
           M   S AKNVVV+GTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGG KTALQL
Sbjct: 1   MSTKSMAKNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGHKTALQL 60

Query: 61  IPSGIMRAGVACYIGNGVVLSVPDLLREIDKLEAAGVEVCSRLKVSDACPLILPYHVALD 120
           IPSGIMR GVACYIGNGVVLSVPD+LREIDKL A GVEV SRLK+S+ACP+ILPYH ALD
Sbjct: 61  IPSGIMREGVACYIGNGVVLSVPDVLREIDKLAAIGVEVPSRLKISEACPIILPYHTALD 120

Query: 121 VAREAARGVDKIGTTGKGIGPAYEDKVARRAIRVADLLNEKRFAEKLLANLDYHNFVLTH 180
           VARE ARG  KIGTTGKGIGPAYEDKVARRAIR ADLLNEKRFAEKLL NLDYHNFVL+H
Sbjct: 121 VAREVARGDAKIGTTGKGIGPAYEDKVARRAIRAADLLNEKRFAEKLLENLDYHNFVLSH 180

Query: 181 YLKTQPVDYQKTLDEALANVPRIKPMVTDVSSDLYAIHKAGGKILFEGAQGSLLDVDHGT 240
           YLK   VDYQKTLD+ALA+VPR+KPMV DVSS LYA H AG  ILFEGAQGSLLDVDHGT
Sbjct: 181 YLKVPAVDYQKTLDDALADVPRLKPMVGDVSSALYAAHNAGANILFEGAQGSLLDVDHGT 240

Query: 241 YPFVTSSNCVAGNAAAGAGVGPGMLHYIMGITKAYTTRVGSGPFPAELPTDAGTGKHLAS 300
           YP+VTSSNCVAGNA+ G+GVGPGMLHYI+GITKAYTTRVGSGPFP+ELPTDAG GKHLA+
Sbjct: 241 YPYVTSSNCVAGNASTGSGVGPGMLHYILGITKAYTTRVGSGPFPSELPTDAGVGKHLAT 300

Query: 301 VGHEFGTVTGRARRCGWFDAALLKRSVQINGVSGMCLTKLDVLDGLESLKLCTGYKLNGK 360
           VGHEFGTVTGRARRCGWFDAALLKRSVQINGV+GMC TKLDVLDGLESL++CTGYKLNGK
Sbjct: 301 VGHEFGTVTGRARRCGWFDAALLKRSVQINGVTGMCFTKLDVLDGLESLRICTGYKLNGK 360

Query: 361 TVDIFPVGAEEAAACEPIYEEMPGWSETTVGAKSLDALPANARAYIKRIEELVGVPIDMI 420
           TVDIFPVGAE+AAACEPIYEEMPGW E+TVGAK+L+ALPANARAYI RIE+LVGVPIDMI
Sbjct: 361 TVDIFPVGAEDAAACEPIYEEMPGWKESTVGAKTLEALPANARAYIDRIEKLVGVPIDMI 420

Query: 421 STGPDREETIVLRHPFK 437
           STGPDREETIVLRHPFK
Sbjct: 421 STGPDREETIVLRHPFK 437


>gi|152980837|ref|YP_001354008.1| adenylosuccinate synthase
           [Janthinobacterium sp. Marseille]
          Length = 455

 Score =  175 bits (444), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 201/473 (42%), Gaps = 87/473 (18%)

Query: 11  VVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGKKTALQLIPSGIMRAGV 70
           V++G Q+GDEGK KIVD L      V RF GG NAGHT+V       L+ IPS +     
Sbjct: 10  VLVGLQYGDEGKAKIVDLLAKGYDIVARFNGGANAGHTVVTRQGTVKLRQIPSAVFYPDK 69

Query: 71  ACYIGNGVVLSVPDLLREIDKLEAAGVEVCSRLKVSDACPLILPYHVALDVAREAARGVD 130
             YIG+G  +SV  L  EI  LE  G+ +  RL VS  C L+ P H+ LD          
Sbjct: 70  LLYIGSGCAVSVVQLAEEIRSLEELGISLRGRLYVSSRCVLVQPSHIHLDQMHG-----K 124

Query: 131 KIGTTGKGIGPAYEDKVARR------AIRVADLLNEKRFA-----EKLLANLDYHNFVLT 179
           +IGTTG GIGP Y D+  R       ++++ DLL +   A     E+  A L  H     
Sbjct: 125 EIGTTGNGIGPCYADRALRMSDGRCISLQIRDLLGDSAAAFEMMHERYAAQLGLHEL--- 181

Query: 180 HYLKTQPVDYQKTLDEALANVPRIKPMVTDVSSDLYAIHKAGGKILFEGAQGSLLDVDHG 239
           H  K+      + L EA A V   K  VTD    L     AG  +LFEGAQ  LLDV +G
Sbjct: 182 HAEKSHVDASMQALQEAWAVV---KAYVTDDPLFLVKRVDAGAHVLFEGAQSVLLDVMYG 238

Query: 240 TYPFVTSSNCVAGNAAAGAGVGPGMLHYIMGITKAYTTRVGSGPFPAELPTDAGTG--KH 297
             P+VTSS+     A  G  +        +G+ KA  +RVGSG FP+EL         +H
Sbjct: 239 DQPYVTSSHTAPSYAYVGGDLPCRYHRKSIGVAKAVMSRVGSGAFPSELGASRSEQYCRH 298

Query: 298 LASVG--------------------------------HEFGTVTGRARRCGWFDAALLKR 325
            A  G                                 E+GT +GR RR G  D   L  
Sbjct: 299 AAQNGIGAASEKAGFDALELLRSDDAFKQGIALRMLTGEYGTGSGRPRRVGLLDIGQLAD 358

Query: 326 SVQINGVSGMCLTKLDVLDGLESLKLCTGYKLNGKTVDIFPVGAEEAAACEPIY------ 379
            V ++G+  + L K D          C  Y         F    +E   C P++      
Sbjct: 359 VVALHGIDEIFLNKCD----------CLAY---------FSYTPQE---CIPMFAGKGGD 396

Query: 380 EEMPGWSETTVGAKSLDALPANARAYIKRIEELVGVPIDMISTGPDREETIVL 432
             M  +   T+  K    +P      ++ IEE     I  +  GP+R++++  
Sbjct: 397 RSMVNFPAFTLEGKE---IPFELLQILQFIEEQTACRIRGVGIGPERDQSVFF 446


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,039,275
Number of extensions: 44626
Number of successful extensions: 162
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 160
Number of HSP's successfully gapped: 2
Length of query: 437
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 351
Effective length of database: 903,079
Effective search space: 316980729
Effective search space used: 316980729
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)