BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2899.p
         (969 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980037|ref|YP_001352831.1| phosphoenolpyruvate carboxylase...  1424   0.0  

>gi|152980037|ref|YP_001352831.1| phosphoenolpyruvate carboxylase
           [Janthinobacterium sp. Marseille]
          Length = 959

 Score = 1424 bits (3686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 720/962 (74%), Positives = 815/962 (84%), Gaps = 17/962 (1%)

Query: 18  PSTAPAVSTARAPAAKR------SPATDKDAPLKEDIRLLGRLLGEVVREQEGDDVFEVV 71
           P+T P VS+   P+AK+      +PAT+KDAPLKEDIRLLGR+LG+V+R+QEGD VFEVV
Sbjct: 5   PTTPPRVSS---PSAKKAVNKAANPATNKDAPLKEDIRLLGRILGDVLRDQEGDAVFEVV 61

Query: 72  ETIRQTAVRFRRESDAKAGAELDKLLKKLTRDQTNSVVRAFSYFSHLANIAEDQHHNRRR 131
           ETIRQTAVRFRRE+D +AGA+L+KLLKKLTR+QT SVVRAFSYFSHLANIAEDQHHNRRR
Sbjct: 62  ETIRQTAVRFRREADVQAGADLNKLLKKLTREQTISVVRAFSYFSHLANIAEDQHHNRRR 121

Query: 132 RAHLLAGSQAQPGSVAYALSRLDDAGVSGAQVRSFLKEALVSPVLTAHPTEVQRKSILDA 191
           RAHLLAGS  Q GSVA+AL +L +AGV+GA VR F K+AL+SPVLTAHPTEVQRKSILDA
Sbjct: 122 RAHLLAGSAPQEGSVAFALEKLANAGVNGATVRKFFKDALISPVLTAHPTEVQRKSILDA 181

Query: 192 EREIARLVAERDLPLTPRELRHNTELLRARIATLWQTRMLRYTKLTVADEIENALSYYRI 251
           E +IARL+A RDLP+T RE   NTELLR+ + TLWQTR+LRY+KL+V DEI NALSYYRI
Sbjct: 182 EHDIARLLAARDLPMTARERAANTELLRSLVTTLWQTRLLRYSKLSVEDEINNALSYYRI 241

Query: 252 TFLRELPALYDDIEAEIDSQFPSRAKARAA--ELPPYLQMGSWIGGDRDGNPNVNAATMQ 309
           TFLRELPALY+DIE+EI  QFP RA +  A  +   Y+QMGSWIGGDRDGNPNVN  TMQ
Sbjct: 242 TFLRELPALYEDIESEIAEQFPQRASSANANRDQHSYVQMGSWIGGDRDGNPNVNGDTMQ 301

Query: 310 HALKRQSTTIFDYYLDEVHTLGAELSISTLMVDASPELLALADASPDHSEHRADEPYRRA 369
            AL RQSTTI ++YL+EVH LGAEL +ST +   SPE+ ALAD SPD SEHRADE YRRA
Sbjct: 302 LALARQSTTILEFYLEEVHALGAELPVSTFLAGVSPEVQALADKSPDTSEHRADEQYRRA 361

Query: 370 LIGIYARLAATARSLGVVNILRQEIGSAAPYANPAECVAELEVLVSSLQAHHGAALIKPR 429
           LIGIYARLAATAR+ G  NILR+E+G  APY +  E  A+L++LV SL+  HGA LIKPR
Sbjct: 362 LIGIYARLAATARAHGATNILRKEVGPGAPYESAVEFSADLQLLVDSLKERHGAVLIKPR 421

Query: 430 LAGVKRAVEIFGFHLATLDMRQSSDIHERVLADLLAKAQVESHYADLSEERKITLLLGEL 489
           LA + RA EIFGFHLATLDMRQSSD+HERVL++L  +A+VE+ YADL E++K+ LLL EL
Sbjct: 422 LAPLLRAAEIFGFHLATLDMRQSSDVHERVLSELFKRAEVETSYADLPEQKKVELLLTEL 481

Query: 490 AQPRLLYSPYLQYAEETESELTILRAAREIRRRYGERAIRNYIISHTETLSDLLEVLLLQ 549
            +PRLLYSPY+ Y++ET SEL ILRAA  IR+RYG RAIRNYIISHTET+SDLLEVLLLQ
Sbjct: 482 DKPRLLYSPYIDYSDETNSELNILRAAHHIRQRYGSRAIRNYIISHTETVSDLLEVLLLQ 541

Query: 550 KETGLLH--IEGKQLQELELMVIPLFETIPDLRCAAQIMRGWLTLPQVKGLIAKHGKLQE 607
           +ETGLL    +   + E+ELMVIPLFETIPDLR AA IM   + +P+V+ LIAK G LQE
Sbjct: 542 RETGLLRPDTDVASVGEVELMVIPLFETIPDLRLAASIMEQVMAIPKVRRLIAKQGHLQE 601

Query: 608 VMLGYSDSNKDGGFLTSNWELYKAENQLVELFNEVGVKLRLFHGRGGTVGRGGGPSYQAI 667
           VMLGYSDSNKDGGFLTSNWELYKAE +LV +FN  GVKLRLFHGRGGTVGRGGGPSY+AI
Sbjct: 602 VMLGYSDSNKDGGFLTSNWELYKAETELVNVFNRAGVKLRLFHGRGGTVGRGGGPSYEAI 661

Query: 668 LAQPPGTVNGQIRLTEQGEIIASKFSNPDIGRRNLELLVAATLEASLMPTGSDDKEARKL 727
           LAQPPGTVNGQIRLTEQGEIIASKFSNP+IGRRNL LLVAATLEASL P  +D K A+KL
Sbjct: 662 LAQPPGTVNGQIRLTEQGEIIASKFSNPEIGRRNLALLVAATLEASLTPPPADRKAAKKL 721

Query: 728 AEFERVMEELSERAYRAYRNLVYETPGFTDYFFAATPIAEIAQLNIGSRPASRKATQRIE 787
           AEFE VM ELSE AY+ YRNLVYETPGFTDYFF+ATPIAEIA+LNIGSRPASRKAT+RIE
Sbjct: 722 AEFESVMAELSELAYKGYRNLVYETPGFTDYFFSATPIAEIAELNIGSRPASRKATRRIE 781

Query: 788 DLRAIPWGFSWGQCRLLLPGWYGFGSAVSGWLEQAGNAKESAKRMSTLRAMCKEWPFFAA 847
           DLRAIPWGFSWGQCRLLLPGWYGFGSA+  WLEQ  N    AKR++TLRAM KEWPFF  
Sbjct: 782 DLRAIPWGFSWGQCRLLLPGWYGFGSAIEQWLEQGEN---KAKRVATLRAMFKEWPFFVT 838

Query: 848 LLSNMDMVLSKTDLAVASRYAGLVADRKLRTSIFGRITDEHERTSTMLSAITGSKERLAG 907
           LLSNMDMVLSKTDLAVASRY+ +V DRKLR SIF RI  EHERTS+ L+ ITG KERLA 
Sbjct: 839 LLSNMDMVLSKTDLAVASRYSEMVVDRKLRNSIFKRIVAEHERTSSCLTLITGKKERLAN 898

Query: 908 NPLLARSIKNRFAYLDPLNHLQVELIKRHRATAAAKRTPEERVQRGIHLTINGVAAGLRN 967
           NPLLARSIKNRFAYLDPLNHLQVELIKRHRA     +  ++RV+RGIHL+ING+AAGLRN
Sbjct: 899 NPLLARSIKNRFAYLDPLNHLQVELIKRHRAAMRDGKI-DDRVRRGIHLSINGIAAGLRN 957

Query: 968 TG 969
           TG
Sbjct: 958 TG 959


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.133    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,929,761
Number of extensions: 74235
Number of successful extensions: 242
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 238
Number of HSP's successfully gapped: 1
Length of query: 969
Length of database: 1,221,021
Length adjustment: 92
Effective length of query: 877
Effective length of database: 880,897
Effective search space: 772546669
Effective search space used: 772546669
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 134 (56.2 bits)