BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2885.p (921 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982608|ref|YP_001352175.1| nitrate reductase catalytic sub... 603 e-173 gi|152981034|ref|YP_001352093.1| formate dehydrogenase alpha sub... 320 2e-88 gi|152981248|ref|YP_001355342.1| NAD-dependent formate dehydroge... 277 2e-75 gi|152982393|ref|YP_001353660.1| formate dehydrogenase large sub... 167 3e-42 gi|152982510|ref|YP_001351822.1| formate dehydrogenase oxidoredu... 92 2e-19 >gi|152982608|ref|YP_001352175.1| nitrate reductase catalytic subunit [Janthinobacterium sp. Marseille] Length = 939 Score = 603 bits (1556), Expect = e-173, Method: Compositional matrix adjust. Identities = 360/946 (38%), Positives = 507/946 (53%), Gaps = 80/946 (8%) Query: 8 LALTVATTRSTCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGET---- 63 +A + T++TC YCGVGCGV + + ++GD HPAN+GRLC KGS L T Sbjct: 17 VAAPLTETKATCCYCGVGCGVLIQSDGEKVVAVRGDPDHPANYGRLCTKGSTLHLTARPA 76 Query: 64 VDLEGRLLHPQVRDAQG-ALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTED 122 + + R L+P++R A+ ++ SW L+ +A KF++ I +HGP++V Y+SGQLLTED Sbjct: 77 LQQQARALYPELRLARTDQRERASWATTLDFLANKFAATIRDHGPDSVGFYLSGQLLTED 136 Query: 123 YYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGAN 182 YY+ NKL KG IG+ N+DTNSRLCMSSAVAG+K+ G D P CYED++ AD+I LVG+N Sbjct: 137 YYVFNKLAKGLIGTNNVDTNSRLCMSSAVAGYKQTLGADAPPPCYEDIDQADVIFLVGSN 196 Query: 183 AAWCHPILFQRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMSYL 242 A+ HPI+++RI ++ PAL++IV DPRRT T ADL LPI GTDV LFNG++ Sbjct: 197 TAYAHPIVYRRIEDARKANPALKVIVADPRRTDTAREADLFLPILPGTDVALFNGMLHIC 256 Query: 243 AHRGLRDNAFIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVV 302 L D +IAAHT GF E P VA +C ++ DL+ + F + + Sbjct: 257 LWEDLVDVDYIAAHTEGFAELKQTVRE--YTPKMVAEICGINEADLMQAARWFGQAKAAL 314 Query: 303 TGFSMGVNQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANMLA 362 + + G+NQSS G+ K ++IN HLAT +IGKPG GPFS+TGQPNAMGGREVGGLA ML+ Sbjct: 315 SMYCQGLNQSSSGTAKNAALINLHLATHQIGKPGAGPFSLTGQPNAMGGREVGGLATMLS 374 Query: 363 AHMDLEQPLHREIVQEFWQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVSLPDA 422 H DL P HR + W + ++PG AV+MF A+ G IK +WI+ TNP S+P+ Sbjct: 375 GHRDLGNPQHRAEIAALWGVDAVPEKPGKSAVEMFEAVRTGEIKLIWIVCTNPAQSMPEQ 434 Query: 423 DLVQRALQKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAFLSA 482 +++ AL+ ELVV + T + YA VLLPA W EK+GTVTNSERRI+R ++ L Sbjct: 435 AMIREALRNAELVVVQEAYRTTASCDYADVLLPASTWSEKEGTVTNSERRITRFKSVLPK 494 Query: 483 PGQARGDWRILCEVAQRM------GFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRV 536 ++R DW I E A+++ + F F G I++EH + R+ Sbjct: 495 LAESRHDWEIAVEFARKLEAVMGKDKSLFPFAGTEEIWNEHRESTRGRD----------- 543 Query: 537 FNLAGLTGLDRASYDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRS 596 +TGL + P QWP +G+ G R+ +D F GRARF+ T + Sbjct: 544 ---LDITGLSFKILEEQGPQQWP---YPEGATTGKKRLYEDGIFPTESGRARFVNTVYQP 597 Query: 597 PGHAPCEDYPLILNTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGL 656 YP L TGR+RD WH M+RTG A L +H E + + D + G L Sbjct: 598 VADRVDARYPFHLTTGRLRDQWHGMSRTGTVAQLFAHAAEPAVAMSKTDMERRQLHNGDL 657 Query: 657 ARISSRWGAMVARVQHGGGIPRGALFVPIHWNGQSAS--------DARVGAVVNPVVDPV 708 ++S+ G+ + V G + G +FV +HW + S V A+ +P DP Sbjct: 658 VHVTSKHGSQIFPVALGEDMRAGQVFVGMHWGEEYVSGRGRDGDGSHGVNALTSPAYDPS 717 Query: 709 SGEPEFKHTPVAIEEFRVGWH----GFILTRHALVL-DDITHWTRVQGRDFVRYELAGRN 763 S +PE KH V I + W G+I L L D+ R F L GR+ Sbjct: 718 SKQPELKHAAVKILKAEFPWRFIAFGWIDEARLLTLQSDLRPLMRKFA--FASCTLFGRD 775 Query: 764 QI-------NDHTAWARALLGVQD----ADADWLEYEDLSDGSYRAVHVVEDRIDMCLFM 812 ++ +D++A + ++ A A L Y+D G+ R + + E ++ Sbjct: 776 KVGVLFRAADDYSAAPELIAQIEQMFGIAGAQVLRYDDSKRGNSRRILIHEGKLQAVALA 835 Query: 813 SARPDLPSRSWLAGLFAKDKLEDADRVGLL-------VGQPIEKGADTGPTVCSCFGVGR 865 D+ + WL K+ LE V L +P + G VC+C V Sbjct: 836 G---DISAEVWL-----KEYLESEQAVATLGRLLLMPSNKPPQNFKSRGRIVCNCLNVSE 887 Query: 866 NTICRAI------KEQGLQEVSQVTACLKAGGNCGSCVPEIKKLLV 905 I A+ + LQ + Q LK G NCGSCVPE+KK++V Sbjct: 888 TEINDALMTMPGTPDARLQALQQK---LKCGSNCGSCVPELKKIIV 930 >gi|152981034|ref|YP_001352093.1| formate dehydrogenase alpha subunit [Janthinobacterium sp. Marseille] Length = 946 Score = 320 bits (821), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 220/723 (30%), Positives = 352/723 (48%), Gaps = 53/723 (7%) Query: 17 STCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEGRLLHPQVR 76 S CPYCGVGC +T +++ + L ++G + PAN RLCVKG + + RL P +R Sbjct: 231 SVCPYCGVGCQLTYNIKDNKILYVEGRDG-PANRERLCVKGRYGFDYANHPHRLTKPLIR 289 Query: 77 DAQG---------------ALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTE 121 A ++ +W+ ALE G F+ I HG ++A + S + E Sbjct: 290 RADAPKSGDFIMDPDRVMEVFREATWEEALEVAGGNFAKIRDTHGKKSLAGFGSAKGSNE 349 Query: 122 DYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGA 181 + Y+ KL++ GS N+D +RLC +S+V G V D+ A++++++GA Sbjct: 350 EAYLFQKLVRTGFGSNNVDHCTRLCHASSVVALLEGIGSGAVSNPVMDVTKAEVVIIIGA 409 Query: 182 NAAWCHPILFQRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMSY 241 N HP+ I +LIV DPRRT +A + KA TDV + N +M+ Sbjct: 410 NPTVNHPVAATWIKNAVSN--GTKLIVCDPRRTEMSRIAHRFMQFKADTDVAMLNAMMNV 467 Query: 242 LAHRGLRDNAFIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKV 301 + GL D FI + T G++E + + P +A +C +D + L + +A + Sbjct: 468 IVTEGLVDKEFIESRTIGYEELRK--NVEGYTPELMAPICGIDAETLRYVARLYATSKGS 525 Query: 302 VTGFSMGVNQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANML 361 + + MGV+Q G+D +I L TG+IG+PG G + GQ N G + G + + Sbjct: 526 MILWGMGVSQHIHGTDNARCLIALALMTGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVY 585 Query: 362 AAHMDLEQPLHREIVQEFWQ-SPRMAD-QPGLKAVDMFRAIEEGRIKAVWIIATNPLVSL 419 + + P R + W S + D +PGL V++ AI +G+I+ +++ NP +S Sbjct: 586 PDYQSVSDPKIRANFAKAWNMSVDLLDPEPGLTVVEIMHAITDGKIRGLYVQGENPAMSD 645 Query: 420 PDADLVQRALQKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAF 479 PDA+ + AL + +V D+ T+T A V+LPA A+ EK GT TN++R + R Sbjct: 646 PDANHAREALAALDHLVVQDIFL-TETAYLADVILPASAFPEKTGTFTNTDRTVQMGRQA 704 Query: 480 LSAPGQARGDWRILCEVAQRMGFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVF-N 538 L+ PG+A+ D I+ ++A R+G + + +FDE +R + Sbjct: 705 LNPPGEAKQDLWIIQQMANRLGLD-WQYKHVSEVFDE----------------MRHTMPS 747 Query: 539 LAGLTGLDRASYDALAPIQWPVQRLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPG 598 +AG+T DR + + +P ++ D G V D F GRARF+P Sbjct: 748 IAGIT-WDRLERED--SVTYPCEKEGDP---GEPVVFVD-SFPRESGRARFVPADIIPAA 800 Query: 599 HAPCEDYPLILNTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLAR 658 P +YP++L TGR +HWHT + T ++ L S P+ IHP D G + G + Sbjct: 801 ERPDPEYPMVLITGRQLEHWHTGSMTRRATVLDSIEPDPIALIHPLDLANMGGKPGDIIT 860 Query: 659 ISSRWGAMVARVQHGGGIPRGALFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTP 718 + SR G + + G PRGA+FVP + +A + + N +DP PEFK+ Sbjct: 861 LQSRRGEVSLYARADDGSPRGAVFVPFCY-----YEAAINRLTNAALDPFGKIPEFKYCA 915 Query: 719 VAI 721 + I Sbjct: 916 IRI 918 >gi|152981248|ref|YP_001355342.1| NAD-dependent formate dehydrogenase alpha subunit [Janthinobacterium sp. Marseille] Length = 957 Score = 277 bits (709), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 202/713 (28%), Positives = 325/713 (45%), Gaps = 44/713 (6%) Query: 17 STCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEGRLLHPQVR 76 +TC YCGVGC A M+ + + + + AN G CVKG + R+L P +R Sbjct: 242 TTCAYCGVGCSFKAEMKGNEVVRMVPNPDGKANQGHACVKGRFAWGYATHKDRMLKPMIR 301 Query: 77 DA-QGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTEDYYIANKLMKGYIG 135 ++VSWD A+ A + I A++G +++ VS + E+ Y+ KL++ G Sbjct: 302 SKITDPWKEVSWDEAINYAASELKRIQAKYGKDSIGGLVSSRCTNEEGYLVQKLVRAAFG 361 Query: 136 SANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAAWCHPILFQRIA 195 + N+DT +R+C S G K GE +E + +D+I+++GAN A HP+ ++ Sbjct: 362 NNNVDTCARVCHSPTGYGLKVTMGESAGTQTFESVMKSDVILVIGANPASGHPVFASQMK 421 Query: 196 KLKETRPALRLIVIDPRRTATCE----LADLHLPIKAGTDVWLFNGLMSYLAHRGLRDNA 251 + R +LIV+DPR T + AD HL +K G++V + N L + L Sbjct: 422 --RRIRQGAKLIVVDPRTTEMVKSPHIQADYHLKLKPGSNVAIVNALAHVIITENLHKPD 479 Query: 252 FIAA--HTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGV 309 FIAA + F+E P + + V D+ + FA + +GV Sbjct: 480 FIAARCEVDSFEEWAEFVSLPENSPEAMEEVSGVPAADIRGAARLFATGGNAAIYYGLGV 539 Query: 310 NQSSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANMLAAHMDLEQ 369 + + GS V I N +ATG IG+ G+G + GQ N G ++G + L + + Sbjct: 540 TEHAQGSTTVIGIANLAMATGNIGRDGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSD 599 Query: 370 PLHREIVQEFWQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVSLPDADLVQRAL 429 + R + W + +PGL+ +MF A +G ++ + + S P+ V AL Sbjct: 600 SVARAEFEAVWGC-TLESEPGLRIPNMFDAAMDGTFMGLYCEGEDIVQSDPNTQHVTAAL 658 Query: 430 QKCELVVSSDVIAQTDTNAYAHVLLPALAWGEKDGTVTNSERRISRQRAFLSAPGQARGD 489 + E ++ D+ +T YAHV LP ++ EKDGT TN+ERRISR R + P GD Sbjct: 659 EAMECIIVQDIFLN-ETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKVM-PPKSGYGD 716 Query: 490 WRILCEVAQRMGFTGFDFDGPHAIFDEHARLSAYRNGQADAGQVRRVFNLAGLTGLDRAS 549 W + ++ +G+ ++ P I DE A L+ G + +R+ L G Sbjct: 717 WEVTQMLSNALGYP-MNYKHPREIMDEIAALTPTFTGVS----FKRIDELGG-------- 763 Query: 550 YDALAPIQWPVQ-RLSDGSINGTARVLQDLRFSHPDGRARFIPTAPRSPGHAPCEDYPLI 608 IQWP +G+ T + +R G+ RFI T G + +PLI Sbjct: 764 -----SIQWPCNAEAPEGT--PTMHTEEFVR-----GKGRFINTKYFGAGEKVNKKFPLI 811 Query: 609 LNTGRVRDHWHTMTRTGKSATLASHIPESFIDIHPQDALLYGVREGGLARISSRWGAMVA 668 L TGR+ ++ +T ++ H E ++IHP DA G+++ I SR G V Sbjct: 812 LTTGRILSQYNVGAQTRRTFNNMWH-SEDRLEIHPHDAEERGIKQDDWVGIESRAGQTVL 870 Query: 669 RVQHGGGIPRGALFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVAI 721 R I G ++ H+ A+ + D + PE+K T V + Sbjct: 871 RADITERIQPGVVYTTFHFPESGAN-----VITTNSSDWATNCPEYKVTAVQV 918 >gi|152982393|ref|YP_001353660.1| formate dehydrogenase large subunit precursor [Janthinobacterium sp. Marseille] Length = 987 Score = 167 bits (422), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 136/522 (26%), Positives = 224/522 (42%), Gaps = 38/522 (7%) Query: 12 VATTRSTCPYCGVGCGVTASMQQDGSLGIKGDEQHPANFGRLCVKGSALGETVDLEGRLL 71 + R+ C +C VGC A ++ + + P N G C KG+AL E E RL Sbjct: 74 IEVKRTVCTHCSVGCASDAIVENGVWVRQEPVFDSPINLGAHCAKGAALREHGHGEYRLK 133 Query: 72 HPQVRDAQGALQQVSWDVALEQVAGKFSSIIAEHGPNAVALYVSGQLLTEDYYIANKLMK 131 +P ++ G Q++SWD AL +++ K I GP++V S + E + K + Sbjct: 134 YP-MKLVNGKYQRISWDQALNEISAKMLDIRKASGPDSVYFVGSSKHNNEQAALMRKFV- 191 Query: 132 GYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLIVLVGANAAWCHPILF 191 + G+ N D +R+C S+ VAG +G + Y D++ + + +G+NAA HP+ Sbjct: 192 SFFGTNNTDHQARICHSTTVAGVANTWGYGAMTNSYNDMQNSKAALYIGSNAAEAHPVSM 251 Query: 192 QRIAKLKETRPALRLIVIDPRRTATCELADLHLPIKAGTDVWLFNGLMSYLAHRGLRDNA 251 + KET ++IV+DPR T T AD ++ I++G+D+ G++ ++ G D Sbjct: 252 LHMLHAKET--GTKMIVVDPRYTRTAAKADQYIRIRSGSDIPFLWGVLYHIFKNGWEDKK 309 Query: 252 FIAAHTNGFDEALAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGVNQ 311 +I G ++ + P V C V ++ + A + MG Q Sbjct: 310 YINDRVYGMEKVR--EEVMKWTPEKVEEACGVPEAEIYKAAETMAMNRPSTIVWCMGQTQ 367 Query: 312 SSVGSDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVG----------GLANML 361 S+G+ V + LA G +GK G G G N G +VG GLA Sbjct: 368 HSIGNAMVRASCILQLALGNVGKSGGGTNIFRGHDNVQGATDVGPNPDSLPGYYGLAAGS 427 Query: 362 AAHMDLEQPLHREIVQEFWQSPRMADQPGLKAVDMFRAI--------EEGRIKAVWIIAT 413 H + E V++ + S M ++ G A+ ++ +KAV Sbjct: 428 WKHWCAVWGVDYEWVKKQYVSQEMMEKSGTTVSRWVDAVLEKSENLDQDNAVKAVLFWGH 487 Query: 414 NPLVSLPDADLVQRALQKCELVVSSD-------------VIAQTDTNAYAHVLLPALAWG 460 P D+ ++A K +L+V D V Q A LLPA Sbjct: 488 APNSQTRGLDM-KKAFDKLDLLVVIDPYPSATAAMAAMKVDGQELNPNRAVYLLPAATQF 546 Query: 461 EKDGTVTNSERRISRQRAFLSAPGQARGDWRILCEVAQRMGF 502 E G+VT S R + + + ++R D I+ ++AQ++GF Sbjct: 547 ETSGSVTASNRSLQWREKVIEPLFESRTDHMIMYQMAQKLGF 588 >gi|152982510|ref|YP_001351822.1| formate dehydrogenase oxidoreductase protein [Janthinobacterium sp. Marseille] Length = 788 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 105/449 (23%), Positives = 175/449 (38%), Gaps = 68/449 (15%) Query: 58 SALGETVDLE----GRLLHPQVRDAQ-GALQQVSWDVALEQVAGKFSSIIAEHGPNAVAL 112 +AL E D E GRL P DA+ V+W VA + +A + P+ A Sbjct: 113 AALFEQSDYELEQHGRLTEPMRYDAKTDKYVPVTWSVAFKLIASHLHKL---DNPHQAAF 169 Query: 113 YVSGQLLTEDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLEL 172 Y SG+ E ++ ++ + G+ N S +C + G G V +D E Sbjct: 170 YTSGRAGNEAAFVYQLFVRMF-GTNNFPDCSNMCHEATSRGLPSTVGVGKGTVTLDDFEH 228 Query: 173 ADLIVLVGANAAWCHPILFQRIAKLKE-TRPALRLIVIDPRR------------------ 213 AD +++ G N A HP + + +L+E ++ ++ I+P R Sbjct: 229 ADTLLIFGQNPATNHP---RMLGELRECSKRGAVIVSINPLRERGLERFADPQSVVEMLT 285 Query: 214 TATCELADLHLPIKAGTDVWLFNGLMSY----------LAHRGLRDNAFIAAHTNGFDEA 263 ++ ++A + K G D L G+ L + D AFIA H GF EA Sbjct: 286 MSSTKIASTFIQPKLGGDFALIKGVAKRTLELDDEAVALGSERVLDTAFIAEHCLGF-EA 344 Query: 264 LAVADADCADPATVARLCKVDLQDLLAFYQAFAETDKVVTGFSMGVNQSSVGSDKVNSII 323 A A+ D + V D+ + + +V+ + MG+ Q V+ + Sbjct: 345 FA-ANLRMQDWQELVDESGVSRDDIEKLSRIYVNGKRVIATWGMGITQHKNSVQTVHMLS 403 Query: 324 NCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANMLAAHMDLEQPLHREIVQEF---- 379 N + G IG+ G G + G N G R VG +E+ +E + Sbjct: 404 NLMMMRGNIGREGAGLCPVRGHSNVQGNRTVG-----------IEEKPSQEFLDRLGKVF 452 Query: 380 -WQSPRMADQPGLKAVDMFRAIEEGRIKAVWIIATNPLVSLPDADLVQRALQKCELVVSS 438 ++ PR G V+ + EG +K + N ++ PD AL+ C+L V Sbjct: 453 NFEPPR---GHGYDVVETIHEMLEGHVKVFIGLGGNFAMATPDTPRTFDALRSCDLTVH- 508 Query: 439 DVIAQTDTNAYAH----VLLPALAWGEKD 463 + + + + H ++LP L E D Sbjct: 509 -ITTKLNRSHLVHGGDALILPTLGRTEID 536 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 2,271,553 Number of extensions: 100710 Number of successful extensions: 298 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 269 Number of HSP's successfully gapped: 5 Length of query: 921 Length of database: 1,221,021 Length adjustment: 92 Effective length of query: 829 Effective length of database: 880,897 Effective search space: 730263613 Effective search space used: 730263613 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)