BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2847.p
         (360 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp...   182   2e-47
gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp...   177   6e-46

>gi|152979847|ref|YP_001354170.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 316

 Score =  182 bits (463), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 19/305 (6%)

Query: 9   RAAAVQIAPDLDSADGTVAKVCEAIAQAAAQGAELVVFPETFVPYYPY-FSFVRPPFAAG 67
           + A  Q A   D A  + AK  + I QA   GA L+VFPE F+  YP   SF  P     
Sbjct: 5   KVAVAQAASHPDDAQASTAKAVDLIGQAHRAGAGLLVFPEAFLGGYPKGASFGAPVGMRK 64

Query: 68  PE----HLLLYERAVELPGPVTQAVSAAARQHGTVVVLGVNERDHGTLYNTQLVFDADGE 123
           PE    +L  +  A++L GP  +A++ A R  G   V+G  ER+ GTLY T L F+    
Sbjct: 65  PEGRQAYLDYFNNAIDLKGPEVEAIAEATRNTGMFAVIGCIERELGTLYCTVLFFNGAQG 124

Query: 124 LVLKRRKITPTYHERMIWGQGDASGLKVVPTAVGRLGALACWEHYNPLARYSLMAQHEEI 183
           LV K RK+ PT  ER+IWG GD S + V  T +G++GA+ CWE+Y P+ R  + +Q   I
Sbjct: 125 LVGKHRKLMPTAGERLIWGFGDGSTMPVFDTPLGKIGAVICWENYMPMLRMYMYSQGIGI 184

Query: 184 HCAQFPGSMVGQIFADQMEVTLRHHALESGCFVVNATGWLTDAQI-----AAIEPDPKAQ 238
           +CA            D    +++H ALE  CFV+ A  ++  +        A+  DP+  
Sbjct: 185 YCAPTADDR------DTWVPSMQHIALEGRCFVLTACQYIKRSAYPATHECALGDDPET- 237

Query: 239 KALRGGCCTAIVSPEGKLLAEPLRSGEGILVADLEMELVTKRKRMMDSVGHYARPELLHL 298
             +RGG  +AI+ P GK+LA P   GE +L A+++ + + + K   D  GHYARP++  L
Sbjct: 238 VLMRGG--SAIIDPLGKVLAGPNFEGEALLYAEIDTDQIVRGKFDFDVAGHYARPDVFQL 295

Query: 299 VIDDR 303
            +D R
Sbjct: 296 AVDTR 300


>gi|152980899|ref|YP_001354766.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 355

 Score =  177 bits (450), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 169/314 (53%), Gaps = 15/314 (4%)

Query: 9   RAAAVQIAPDLDSADGTVAKVCEAIAQAAAQGAELVVFPETFVPYYPYFSFVRPPFAAGP 68
           +AAA   AP       T+ K C+ IA+AA  GA L+ FPE FV  +P +  V  P     
Sbjct: 8   KAAACHAAPIYFDTPATIDKACDLIAEAARNGASLIAFPEAFVSAFPIWCGVWAPVETHE 67

Query: 69  EHLLLYERAVELPGPVTQAVSAAARQHGTVVVLGVNER---DHGTLYNTQLVFDADGELV 125
               L   A+E+ GP    +  AAR+HG  V +G+NE      G +++T ++   DG ++
Sbjct: 68  FFFKLASSAIEINGPEVAQLREAARRHGVFVSMGINEGTPISMGCVWDTNILIGDDGSIL 127

Query: 126 LKRRKITPTYHERMIWGQGDASGLKVVPTAVGRLGALACWEHYNPLARYSLMAQHEEIHC 185
            + RK+  T+ E++ W  GD SGL+VV T +GR+GAL C E+ N LAR+SLMAQ E +H 
Sbjct: 128 NRHRKLIATHWEKLAWASGDGSGLRVVDTRIGRIGALVCGENTNALARFSLMAQGENVHI 187

Query: 186 A----QFPGSMVGQIFADQMEVTLRHH----ALESGCFVVNATGWLTDAQIAAI-EPDPK 236
           +    ++P    G++  D +E ++R      A E   F + A+G+L    I  I   DP+
Sbjct: 188 SAYSPRWPTHPSGEVAYD-LEASIRLRAGAAAFEGKMFNIVASGFLPPEAIDMISRNDPR 246

Query: 237 AQKALR--GGCCTAIVSPEGKLLAEPLRSGEGILVADLEMELVTKRKRMMDSVGHYARPE 294
            ++ +       + I+ P+G  +++ L+  EGI+ AD+++      K+  D VG+Y R +
Sbjct: 247 VRRLMEEASKSVSMIMGPDGMPISDTLQDEEGIVYADIDLAKCVVPKQFQDVVGYYNRFD 306

Query: 295 LLHLVIDDRPAAPM 308
           +  L ++ R   P+
Sbjct: 307 VFELKVNRRALTPV 320


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 857,035
Number of extensions: 35904
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 2
Length of query: 360
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 276
Effective length of database: 910,473
Effective search space: 251290548
Effective search space used: 251290548
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)