BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2843.p
         (387 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980847|ref|YP_001353987.1| glycosysltransferase [Janthinob...    68   9e-13

>gi|152980847|ref|YP_001353987.1| glycosysltransferase
           [Janthinobacterium sp. Marseille]
          Length = 349

 Score = 68.2 bits (165), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 121/303 (39%), Gaps = 60/303 (19%)

Query: 10  GGVVHALQLA-EGLQALGHETTLLAPDAAGKGLFRRAACHFHPVPGALHSADIADMVRLR 68
            GVV+ L+   + L+A GH   ++ P+       R  +C  +P             +RL 
Sbjct: 15  NGVVNTLKATRKQLRANGHAVLMVTPEN-----MRSYSCPTYP------------EIRLA 57

Query: 69  IEDYLRCFAQPGMTDFDLYH--AQDSISANALATLTERGM---------IAGYVRTVHHL 117
            + Y +  A     D D  H   +  +   A      RG+            Y+RT  HL
Sbjct: 58  YKPYAKVAAALEDFDPDCIHIATEGPMGLAARRFCINRGLDFTTAYHTRFPEYLRTRFHL 117

Query: 118 DQFEDSRLHRWQERGYRAADRVLCVSRTWQEILRREHGVQAELVSNGVDTQRYTPQASHR 177
                +  +RW +  +R A  V+  +   Q+ L +         S GVDT  + P   H 
Sbjct: 118 PL---ALTYRWLKWFHRPAKAVMVPTPRMQDALEKSGFKNVVQWSRGVDTDYFRP-GQHE 173

Query: 178 DAALRAQLGLDGTPLLLAVGGVEPRKNTLGILRAFVRLRRVYPQAQLVIAGGASVLDHAA 237
           +            PL L VG V   KN    + AF+         Q+ + G   V+    
Sbjct: 174 EVT-------HERPLYLYVGRVAVEKN----IEAFL---------QMELPGAKWVIGDGP 213

Query: 238 YQQQFQREWQAAGLPAGALRILGQVADADMPALFRCADALVFPSLKEGFGLVVLEAMASG 297
            +++ ++++         +  LG      +PA + CAD  VFPS  + FGLV++EAMA G
Sbjct: 214 MREELEKKYPD-------VHFLGAKPHDALPAYYNCADVFVFPSRTDTFGLVLVEAMACG 266

Query: 298 VPV 300
           VPV
Sbjct: 267 VPV 269


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 906,308
Number of extensions: 36258
Number of successful extensions: 155
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 155
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 302
Effective length of database: 906,776
Effective search space: 273846352
Effective search space used: 273846352
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)