BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2836.p
         (400 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase ...   327   1e-90
gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase [J...   183   2e-47

>gi|152980194|ref|YP_001352245.1| acetyl-CoA C-acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 391

 Score =  327 bits (837), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 183/395 (46%), Positives = 246/395 (62%), Gaps = 8/395 (2%)

Query: 4   DPVVIVSAARTVMGSFQGALADLPAPQLGALAIAAALQRARLSAQQIAQIEQVWMGCVLQ 63
           D VVIVSA RT +G F GALA   A  LGA  I   L R+ ++A QI++   V +G VL 
Sbjct: 2   DDVVIVSAGRTGVGKFGGALARTAASDLGAHVIKNLLARSGIAADQISE---VILGQVLT 58

Query: 64  AGLGQSPARQAALRAGLPQSVACATLNKVCGSAMQAVMLAHDSILAGSASLVVAGGMESM 123
           AG GQ+PARQA +R G+P  V   T+NKVCGS ++A  LA  +I  G A +++AGG E+M
Sbjct: 59  AGCGQNPARQALIRGGIPDMVPAFTINKVCGSGLKATHLATQAIRCGDAQIIIAGGQENM 118

Query: 124 SNAPYLLPKARRGYRLGHDRLLDHMFLDGLEDAYSDQYRGRLMGTFAEDCASDFGFTRDQ 183
           S +P++L  +R G+R+G  +L+D M  DGL D Y +QY    MGT AE+ A  FG +R +
Sbjct: 119 SASPHVLNNSRDGFRMGDAKLVDIMIHDGLWDVY-NQYH---MGTTAENIAKKFGISRQE 174

Query: 184 QDAYAVQSTLRARQAISSGGFDWEVVPVEVAGKKGSVVIAEDEG-PMAVNLERIATLKPA 242
           QD +A++S  +A  A  +G F  E++P E+  KKG+ V   DE       LE +A L+PA
Sbjct: 175 QDEFALESQNKAEAAQKAGKFKDEIIPFEIQSKKGNTVFDSDEYIKHGTTLESLAALRPA 234

Query: 243 FRGDGTVTAANSSSISDGAAALVLMRESEALRQGLTPLARILGHASYAGAPEKFPTAPIG 302
           F  DGTVTA N+S I+DGAAA+++M   +A   GL PLA+I  ++S    P      P+ 
Sbjct: 235 FSKDGTVTAGNASGINDGAAAVIMMTAQKAKELGLKPLAKIKAYSSAGVDPSVMGMGPVP 294

Query: 303 VLRKIFAKTGLDAVSTDLFEINEAFAVVPMAASRELNIDMEKINVHGGACALGHPIGASG 362
             +    K G      DL EINEAFA   +A +RE+  D  KINV+GGA A+GHPIGASG
Sbjct: 295 AAQLCLKKAGWKHQDLDLMEINEAFAAQAIAVNREMGWDTRKINVNGGAIAIGHPIGASG 354

Query: 363 ARIIVSLLGALKARGLKTGIASLCIGGGEATAIAL 397
            RI+V+LL  +  R    G+ASLCIGGG   A+A+
Sbjct: 355 CRILVTLLHEMIRRDAHKGLASLCIGGGMGVALAI 389


>gi|152979836|ref|YP_001354779.1| acetyl-CoA acetyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 398

 Score =  183 bits (464), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 202/396 (51%), Gaps = 30/396 (7%)

Query: 8   IVSAARTVMGSF-QGALADLPAPQLGALAIAAALQRARLSAQQIAQIEQVWMGCVL-QAG 65
           IV+A RT +G   +G   +     L   A+ +AL  +++ +     IE   +GC   +A 
Sbjct: 10  IVAATRTPIGKAPRGMFKNTRPDDLLVHALQSAL--SQVPSLDPNLIEDAIVGCSFPEAE 67

Query: 66  LGQSPARQAALRAGLPQSVACATLNKVCGSAMQAVMLAHDSILAGSASLVVAGGMESMSN 125
            G + AR   L AGLP++V   T+N+ C S + A+ +A D I  G A +++A G ESMS 
Sbjct: 68  QGLNMARMGVLLAGLPKTVGGVTVNRYCASGLTAIAMAADRIRVGEADVMIAAGAESMSM 127

Query: 126 APYLLPKARRGYRLGHDRLLDHMFLDGLEDAYSDQYRGRLMGTFAEDCASDFGFTRDQQD 185
            P +          GH   ++       E+     Y    MG  AE  A+ +  +R+ QD
Sbjct: 128 VPMM----------GHHPSMNMGIFK--EENIGMAYG---MGLTAEKVATQWKVSREAQD 172

Query: 186 AYAVQSTLRARQAISSGGFDWEVVPVEVAGKKGSV----------VIAEDEGPMA-VNLE 234
            +A+ S L+A  A  SG F+ E+  VE+  +  ++          ++  DEG  A  NLE
Sbjct: 173 QFALNSHLKALAAQQSGEFNNEMTAVEIVERFPNLSSGQIDVTTRLVNMDEGARADTNLE 232

Query: 235 RIATLKPAFRGDGTVTAANSSSISDGAAALVLMRESEALRQGLTPLARILGHASYAGAPE 294
            +A L+P F   G+VTA NSS  SDGA AL+L+ E    +  LTPLAR +  A     PE
Sbjct: 233 ALAKLRPVFSPKGSVTAGNSSQTSDGAGALILVSEKILKQFNLTPLARFVSFAVRGVPPE 292

Query: 295 KFPTAPIGVLRKIFAKTGLDAVSTDLFEINEAFAVVPMAASRELNIDMEKINVHGGACAL 354
                P   +       GL     D  E+NEAFA   +A  ++L +D  K+N  GGA AL
Sbjct: 293 IMGIGPKEAIPAALRVAGLKQDQMDWIELNEAFAAQALAVIQDLGLDPAKVNPMGGAIAL 352

Query: 355 GHPIGASGARIIVSLLGALKARGLKTGIASLCIGGG 390
           GHP+GA+GA    +++ AL+ + LK G+ ++C+G G
Sbjct: 353 GHPLGATGAIRSATVVHALRRKNLKYGMVTMCVGTG 388


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.133    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 852,390
Number of extensions: 34163
Number of successful extensions: 149
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 145
Number of HSP's successfully gapped: 2
Length of query: 400
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 315
Effective length of database: 906,776
Effective search space: 285634440
Effective search space used: 285634440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)