BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2763.p (349 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxid... 542 e-155 gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [... 180 1e-46 gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [... 157 8e-40 gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxid... 93 2e-20 >gi|152982773|ref|YP_001352426.1| aldo/keto reductase family oxidoreductase TAS [Janthinobacterium sp. Marseille] Length = 349 Score = 542 bits (1396), Expect = e-155, Method: Compositional matrix adjust. Identities = 257/348 (73%), Positives = 292/348 (83%) Query: 1 MQYRQLGRTDAKVSLITLGTMTWGEQNTEAQAHAQLDYAVERGINLIDVAEMYPVPPKAE 60 M+Y+QLG+TD KVS I LGTMTWGEQNTEA+AHAQLD A+ G+NLID AEMYPVPPK E Sbjct: 1 MKYQQLGKTDIKVSNIALGTMTWGEQNTEAEAHAQLDMAIAAGVNLIDAAEMYPVPPKPE 60 Query: 61 TQGLTERYLGTWLKKSGKRDQLLIATKCTGPARKPHNPRHIRGGINDLDRKGLTEALHGS 120 TQGLTERYLGTWLKKSGKRDQL+IATK GPAR PH P+H+R G DR LT+ALHG+ Sbjct: 61 TQGLTERYLGTWLKKSGKRDQLIIATKAAGPARLPHQPQHVRHGKTSFDRASLTDALHGN 120 Query: 121 LERLQLDHVDLYQLHWPDRSVNSFGQLGYQHVADETTVPIEETLKVLSEFVKAGKIRYIG 180 LERLQ D++DLYQLHWPDRSVN FG+ Y H DE TVPI ETL VL++FVK GKIRYIG Sbjct: 121 LERLQTDYIDLYQLHWPDRSVNIFGRQNYTHFPDEDTVPIAETLSVLADFVKQGKIRYIG 180 Query: 181 LSNETAWGVAQFLRAAEQHGLERIVTIQNPYNLLNRSFEVNLAEFAHREQVGLLAYSPLA 240 +SNET WG+AQFLRA+EQ L RIV+IQNPY+L+NR FE+ L+EF+H+EQ+GLLAYSPLA Sbjct: 181 VSNETPWGLAQFLRASEQLNLPRIVSIQNPYSLVNRYFEIALSEFSHQEQIGLLAYSPLA 240 Query: 241 FGMLSGKYLDGARPAGGRLTLFERFSRYTNPQAEGATAQYVALARQHGLDPAQMALAYVN 300 FG+LSGKYL GARPA GR+TLFERF RY PQ E A YVALAR+HGLDPAQMALAYVN Sbjct: 241 FGVLSGKYLHGARPADGRITLFERFVRYKAPQVETAVEAYVALARKHGLDPAQMALAYVN 300 Query: 301 SRPFLTSNIIGATTLEQLRSNIDSAQLQLSEEVLAGIEAIHRKQPNPA 348 +RPFLTS IIGATTL QL+SN+DS L+L E VL GIE IH + PNPA Sbjct: 301 TRPFLTSTIIGATTLGQLQSNLDSINLELDEAVLNGIEEIHNRHPNPA 348 >gi|152981199|ref|YP_001351939.1| hypothetical protein mma_0249 [Janthinobacterium sp. Marseille] Length = 337 Score = 180 bits (457), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/350 (34%), Positives = 182/350 (52%), Gaps = 52/350 (14%) Query: 3 YRQLGRTDAKVSLITLGTMTWGEQNTEAQAHAQLDYAVERGINLIDVAEMYPVPPKAETQ 62 YR GRT K+S +TLG M +G + +D A++ GIN+ID A +Y + Sbjct: 6 YRNFGRTGVKISPLTLGCMMFGNKTELDDTVRIIDRAIDAGINIIDTANVY-------AR 58 Query: 63 GLTERYLGTWLKKSGKRDQLLIATKCTGPARKPHNPRH-IRGGINDLDRKGLTEALHGSL 121 G +E + G LK++GKR + +A+K H P H G + R+ + + + SL Sbjct: 59 GRSEEFTGEALKRNGKRKDIFLASKV-------HLPMHDTDGNLRGSSRRHIIQQVEDSL 111 Query: 122 ERLQLDHVDLYQLHWPDRSVNSFGQLGYQHVADETTVPIEETLKVLSEFVKAGKIRYIGL 181 RLQ D++DLYQ+H P E T I+ETL+ L + VK+GK+RYIG Sbjct: 112 RRLQTDYLDLYQIHRP-----------------EPTTAIDETLRALDDLVKSGKVRYIGS 154 Query: 182 SNETAWGVAQFLRAAEQHGLERIVTIQNPYNLLNRSFEVNLAEFAHREQVGLLAYSPLAF 241 + W V + L A+++ GL R V+ Q PYNLL+R E L A + ++ +SP+ Sbjct: 155 TTFAGWQVVEALWASKELGLNRFVSEQPPYNLLDRRIERELLPVAETFGLAVIPWSPIGG 214 Query: 242 GMLSGKYLDGARPAGGRLTLFERFSRYTNPQAEGATAQYV-----------ALARQHGLD 290 G+LSGKY G +P SRYTNP A ++V LA + G+ Sbjct: 215 GLLSGKYRKG-QP-------LPLDSRYTNPNPMQAR-RFVDRVFDVIEPLSELAAEKGVP 265 Query: 291 PAQMALAYVNSRPFLTSNIIGATTLEQLRSNIDSAQLQLSEEVLAGIEAI 340 +Q+ALA+V + +TS I G TLEQL + + +++L+ E L I+AI Sbjct: 266 LSQLALAWVAQQRGVTSAITGPRTLEQLEDALQAIEVKLTPEDLQRIDAI 315 >gi|152981244|ref|YP_001351942.1| hypothetical protein mma_0252 [Janthinobacterium sp. Marseille] Length = 337 Score = 157 bits (398), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 110/335 (32%), Positives = 176/335 (52%), Gaps = 36/335 (10%) Query: 1 MQYRQLGRTDAKVSLITLGTMTWGEQNTEAQAHAQLDYAVERGINLIDVAEMYPVPPKAE 60 MQY LG++ KVS + LGTM +G + E +H + +A E GIN ID A++Y Sbjct: 1 MQYENLGKSGLKVSRLCLGTMMFGGASDEQTSHQIIQHAHEHGINFIDTADIY------- 53 Query: 61 TQGLTERYLGTWLKKSGKRDQLLIATKCTGPARKPHNPRHIRGGINDLDRKGLTEALHGS 120 T G +ER +G + + +RD+ ++ATK + K N + L R+ + +A+ S Sbjct: 54 TGGESERVVGKGI--AAQRDKWVLATKVGNGSDKWPNEK-------GLSRRRIIQAVEQS 104 Query: 121 LERLQLDHVDLYQLHWPDRSVNSFGQLGYQHVADETTVPIEETLKVLSEFVKAGKIRYIG 180 L+RL D++D+Y LH PD + P+ ET++ L + + GKIRY G Sbjct: 105 LQRLGTDYIDIYYLHRPDPAT-----------------PLHETVRALGDLIAQGKIRYFG 147 Query: 181 LSNETAWGVAQFLRAAEQHGLERIVTIQNPYNLLNRSFEVNLAEFAHREQVGLLAYSPLA 240 LSN +AW +A+ + +++ G+ + Q YN NR EV H +G+++YSPLA Sbjct: 148 LSNFSAWQLAEVVHLSKELGVAPPIVSQPYYNAANRMPEVEHLPACHFHGLGVVSYSPLA 207 Query: 241 FGMLSGKYLDGARP-AGGRLTLFERFSRYTNPQAEG-ATAQYV-ALARQHGLDPAQMALA 297 G+L+GKYL G P R+ ++ + T + E A AQ + A+ HG ++ALA Sbjct: 208 RGVLTGKYLPGNEPDQNSRVGRGDKRALQTEWRPESIALAQALQEHAQVHGTTNIELALA 267 Query: 298 YVNSRPFLTSNIIGATTLEQLRSNIDSAQLQLSEE 332 +V + +TS I G T EQ ++ ++ + E Sbjct: 268 WVLNNRLVTSVIGGPRTFEQWQAYLNGLNYHFTPE 302 >gi|152981140|ref|YP_001355236.1| aldo/keto reductase family oxidoreductase [Janthinobacterium sp. Marseille] Length = 277 Score = 93.2 bits (230), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 79/325 (24%) Query: 13 VSLITLGTMTW---GEQNTEAQAHAQLDYAVERGINLIDVAEMYPVPPKAETQGLTERYL 69 +++ LG TW E + A A L ++ G+ LID AEMY G +E+ + Sbjct: 10 LAVPVLGQGTWYMGDEAHRRADEIASLRLGLDLGMTLIDTAEMY-------GDGASEKLV 62 Query: 70 GTWLKKSGKRDQLLIATKCTGPARKPHNPRHIRGGINDLDRKGLTEALHGSLERLQLDHV 129 G + +G+RD++ + +K P N R G A SL RL D + Sbjct: 63 GEAI--AGRRDEVFLVSKVL-----PSNA----------SRSGTIAACERSLRRLGTDCI 105 Query: 130 DLYQLHWPDRSVNSFGQLGYQHVADETTVPIEETLKVLSEFVKAGKIRYIGLSNETAWGV 189 DLY LHW R+ P ET+ AGKIR+ G+SN + Sbjct: 106 DLYLLHWRGRT------------------PFAETIAAFEALQDAGKIRHWGVSNMDVDDM 147 Query: 190 AQFLRAAEQHGLERIVTIQNPYNLLNRSFEVNLAEFAHREQVGLLAYSPLAFGMLSGKYL 249 + RA G + + T Q YNL R E +L A + L+AYSP+ Sbjct: 148 REIARAP---GGDAMATNQVLYNLTRRGIEFDLLPQAQARGLPLMAYSPI---------- 194 Query: 250 DGARPAGGRLTLFERFSRYTNPQAEGATAQYVALARQHGLDPAQMALAYVNSRPFLTSNI 309 GRLT + + + +A +HG+ PAQ+ALA+V + + + I Sbjct: 195 -----EQGRLTEY---------------PEVLDIADRHGVTPAQVALAWVLRQEGVIA-I 233 Query: 310 IGATTLEQLRSNIDSAQLQLSEEVL 334 A+T E +R N + LQL+ E L Sbjct: 234 PKASTPEHVRENRAALDLQLTAEDL 258 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.317 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 815,586 Number of extensions: 33279 Number of successful extensions: 116 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 106 Number of HSP's successfully gapped: 4 Length of query: 349 Length of database: 1,221,021 Length adjustment: 84 Effective length of query: 265 Effective length of database: 910,473 Effective search space: 241275345 Effective search space used: 241275345 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)