BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2720.p (314 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980777|ref|YP_001354247.1| malonyl CoA-ACP transacylase [J... 251 3e-68 gi|152982614|ref|YP_001351800.1| malonyl CoA-ACP transacylase [J... 167 1e-42 gi|152979803|ref|YP_001353047.1| [acyl-carrier-protein] S-malony... 110 1e-25 >gi|152980777|ref|YP_001354247.1| malonyl CoA-ACP transacylase [Janthinobacterium sp. Marseille] Length = 315 Score = 251 bits (642), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 148/318 (46%), Positives = 200/318 (62%), Gaps = 8/318 (2%) Query: 1 MSMRLAILCPGQGAQHAGMFDLLREDAQAAAFLAQCPLRDQLQAPLEQVLNDPAQRYANR 60 M R+AILC GQ QHAGMFDL REDA+A L PL D PL+ +L+D +AN Sbjct: 1 MMNRIAILCSGQAGQHAGMFDLAREDARAGRLLQAWPLEDLCGHPLQDILSDEKLLFANP 60 Query: 61 NAQPLIVAAQLAAWQALRAPLSAIAGAPTLVAGYSVGELSAYAVAGVIAAEDTVALAAQR 120 AQPL+VA+ LA W+A++ I P +VAGYS+GEL+++AVAG + AE + LAA R Sbjct: 61 IAQPLVVASILATWEAVKN----IIPKPVVVAGYSIGELASWAVAGALTAEVAIRLAALR 116 Query: 121 AAAMTQAASAYPQQGLMAISG----VAIDSVQACLARHGGFVAIVTGDDSLIAGGSDAAL 176 A + + Q ++A+S + + +Q L HG ++AI +DS+IAGG Sbjct: 117 ARLLQACIADGQPQVMLAVSLSQALIQMAEIQPLLQAHGFYMAIEVDEDSIIAGGLLQQA 176 Query: 177 HAAAAELAGQGARNSALPVGLASHTPLMQAAVAPFSAHLDALALCSPALTLLAGVTGHTV 236 A A + G + + LP+ +ASHTP MQAAVAP + L + A+ +PA +LAG++G + Sbjct: 177 DALEAAITNAGGKVTRLPIEIASHTPWMQAAVAPLAEALASSAIKAPAFPVLAGISGARL 236 Query: 237 SDSAQAQALLLRQLCEPIQWSACMDACAERGVNVALELGPGAALSRMLRERHPHIACRSL 296 D A L RQL EPI+W A MD+ E GV +ALELGPGAAL+RML+ RHPHI CRS+ Sbjct: 237 LDKDAAAGHLSRQLAEPIRWQAVMDSLDEAGVTMALELGPGAALARMLKTRHPHIQCRSI 296 Query: 297 ADFRSLNGALAWLRRQAD 314 A+FRSL G W+ + AD Sbjct: 297 AEFRSLAGIRKWMAQYAD 314 >gi|152982614|ref|YP_001351800.1| malonyl CoA-ACP transacylase [Janthinobacterium sp. Marseille] Length = 287 Score = 167 bits (422), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/262 (39%), Positives = 140/262 (53%), Gaps = 19/262 (7%) Query: 57 YANRNAQPLIVAAQLAAWQALRAPLSAIAGAPTLVAGYSVGELSAYAVAGVIAAEDTVAL 116 ++NRNAQ LI A++A W AL+ L P L GYSVGEL+AY AG A ++ L Sbjct: 37 FSNRNAQLLICGAEIATWTALQERLPQ----PELFIGYSVGELAAYGCAGAWAVKELGLL 92 Query: 117 AAQRAAAMTQAASAYPQQ-GLMAISGVAIDSVQACLARHGGFVAIVTGDDSLIAGGSDAA 175 QRA M Q A P+ G++AI GV ++ RH +AI+ +D + GG Sbjct: 93 VPQRALLMDQVA---PKNAGMLAIKGVGAAAIDDICKRHRLELAIINAEDHFVLGGLRDD 149 Query: 176 LHAAAAELAGQGARNSALPVGLASHTPLMQAAVAPFSAHLDALALCSPALTLLAGVTG-- 233 + AA E+ G AL V + SHT LM+ AV PF L A + +LAG+ G Sbjct: 150 IEAAVVEITAAGHWCKALDVAIPSHTSLMRTAVQPFRHLLKTTAAHALTAPVLAGINGLS 209 Query: 234 ---HTVSDSAQAQALLLRQLCEPIQWSACMDACAERGVNVALELGPGAALSRMLRERHPH 290 T++D+ AQ + EP++W CMD ERG+ V LELGPG ALSRM E Sbjct: 210 EPERTIADTLSAQ------IAEPVRWQDCMDTTVERGITVVLELGPGRALSRMFDELGVA 263 Query: 291 IACRSLADFRSLNGALAWLRRQ 312 + RS DFR+L+G + W+ + Sbjct: 264 VEARSAEDFRTLDGIVKWVETR 285 >gi|152979803|ref|YP_001353047.1| [acyl-carrier-protein] S-malonyltransferase [Janthinobacterium sp. Marseille] Length = 310 Score = 110 bits (275), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 153/314 (48%), Gaps = 13/314 (4%) Query: 4 RLAILCPGQGAQHAGMFDLLREDAQAAAFLAQCPLRDQLQAPLEQVLND-PAQRYA-NRN 61 + A + PGQG+Q GM + ++A LA+ D LQ L +++++ P + N Sbjct: 3 KFAFVFPGQGSQAIGMLNGFADNAVVQQTLAEA--SDALQFDLAKLISEGPKEELDLTTN 60 Query: 62 AQPLIVAAQLAAWQALRAPLSAIAGAPTLVAGYSVGELSAYAVAGVIAAEDTVALAAQRA 121 QP+++ A +A + RA ++A P LVAG+S+GE SA AGVIA +D V L RA Sbjct: 61 TQPVMLTAAVAMY---RAWIAAGGKTPALVAGHSLGEYSALVAAGVIAFKDAVPLVRFRA 117 Query: 122 AAMTQAASAYPQQGLMAISGVAIDSVQACLAR--HGGFVAIVTGDD--SLIAGGSDAALH 177 AM Q A Q G+ AI G++ V A A G V V + ++ G AA+ Sbjct: 118 KAM-QEAVPVGQGGMAAILGLSDADVLAVCAEAAQGDVVEAVNFNAPAQVVIAGHKAAIE 176 Query: 178 AAAAELAGQGARNS-ALPVGLASHTPLMQAAVAPFSAHLDALALCSPALTLLAGVTGHTV 236 A +GA+ + +LPV H+ L++ A ++ L +P + L+ V V Sbjct: 177 RACEVAKAKGAKRALSLPVSAPFHSSLLKPASDRLREYMATLTFNAPQIPLINNVDVAIV 236 Query: 237 SDSAQAQALLLRQLCEPIQWSACMDACAERGVNVALELGPGAALSRMLRERHPHIACRSL 296 SD + L+RQ P++W + A G+ +E GPG L+ + + + + ++ Sbjct: 237 SDVDGIKDALVRQAANPVRWVESVQKMAAEGITDVVECGPGKVLAGLTKRINGELTGHAI 296 Query: 297 ADFRSLNGALAWLR 310 D SL+ L L+ Sbjct: 297 VDQASLDAVLELLK 310 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.130 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 604,030 Number of extensions: 19129 Number of successful extensions: 106 Number of sequences better than 1.0e-08: 3 Number of HSP's gapped: 99 Number of HSP's successfully gapped: 3 Length of query: 314 Length of database: 1,221,021 Length adjustment: 83 Effective length of query: 231 Effective length of database: 914,170 Effective search space: 211173270 Effective search space used: 211173270 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)