BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2713.p
         (160 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982961|ref|YP_001353990.1| hypothetical protein mma_2300 [...    97   6e-22

>gi|152982961|ref|YP_001353990.1| hypothetical protein mma_2300
           [Janthinobacterium sp. Marseille]
          Length = 258

 Score = 96.7 bits (239), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 73/130 (56%), Gaps = 30/130 (23%)

Query: 31  KPAAKPAARPAAKTAAPAKPAPAAAAAPKLEKKVEKADKPAKIEKVEKVEKIEKAPKAKK 90
           KPAAKP  +PAAK A P    P A                                K KK
Sbjct: 157 KPAAKPVVKPAAKPATPVLAKPVAEV------------------------------KGKK 186

Query: 91  VKQVRDSFTMPENEYAVLAQVKKSCLKAGVEIKKSDLLRIGVSLIKNLKIAELKDILGSL 150
            K VRDSFTMPE EY VL+ VKK+ LKAGV +KKS+LLR GV+LIK+L + +L  ++  L
Sbjct: 187 AKLVRDSFTMPEIEYQVLSDVKKAFLKAGVAVKKSELLRAGVALIKDLDMKKLNAVITGL 246

Query: 151 TPLKVGRPKK 160
           +PLK GRPKK
Sbjct: 247 SPLKAGRPKK 256


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.308    0.124    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 145,740
Number of extensions: 3886
Number of successful extensions: 10
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 84
Effective length of database: 940,049
Effective search space: 78964116
Effective search space used: 78964116
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 126 (53.1 bits)