BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2696.p
         (258 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980720|ref|YP_001354147.1| uroporphyrin-III C-methyltransf...    92   4e-20
gi|152980308|ref|YP_001352177.1| uroporphyrin-III C-methyltransf...    84   1e-17

>gi|152980720|ref|YP_001354147.1| uroporphyrin-III
           C-methyltransferase [Janthinobacterium sp. Marseille]
          Length = 239

 Score = 91.7 bits (226), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 26/244 (10%)

Query: 2   KVYFVGAGPGAADLITLRGARLLGQVRMVLYAGSLVPTALLEHCHAEAEIID-------- 53
           KVY +GAGPGA DLIT+RGAR+L Q  +VL+  +LV   +LE C  +AE I         
Sbjct: 10  KVYLIGAGPGAVDLITVRGARILAQADVVLH-DALVTPEMLELC-PQAEKISVGKRSGQR 67

Query: 54  -TAALDLEQQQACYVRAYEQGIDVVRLHSGDPAIYGATAEQMRRLDALGIAYEVVPGVSS 112
            TA L + Q        Y+    +VRL  GDP ++G   E++  L+A GI  E+VPG+++
Sbjct: 68  STAQLAINQLLVDCAAKYKL---IVRLKGGDPMLFGRADEELHALEAHGIEIEIVPGITT 124

Query: 113 FTAAAAAVSAELTKPEVSQSVILTRVSGRASAVPESESIASLAAHRATMCIFLSGPHLKK 172
             AAAAA    LTK  +++S+     S  A   P+  ++        T+  ++ G     
Sbjct: 125 AFAAAAAAQLPLTKRGIARSIAFF-TSATAPNQPDQLTLPDC----DTLIQYMGGREAMV 179

Query: 173 IVTDLLLH-YPPETPVTLVYRATWPEQRVYQGQLDKVLEENKRG--EWNLTTMMLVGAAL 229
               LL     P+ PV +V   + P Q++ +      L E +RG  +     ++++GAAL
Sbjct: 180 TAQKLLEQGRSPDLPVVIVENCSLPNQKIVRMN----LRELERGLQDTQGPVLVMIGAAL 235

Query: 230 NKEQ 233
              Q
Sbjct: 236 AARQ 239


>gi|152980308|ref|YP_001352177.1| uroporphyrin-III
           C-methyltransferase [Janthinobacterium sp. Marseille]
          Length = 270

 Score = 83.6 bits (205), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 12/201 (5%)

Query: 2   KVYFVGAGPGAADLITLRGARLLGQVRMVLYAGSLVPTALLEHCHAEAEIIDTAALDLEQ 61
           KV+ VGAGPG  DL+T++  + +G   ++L    LV   +L++  A A I++       Q
Sbjct: 14  KVFLVGAGPGDPDLLTIKAVKAIGCADVILID-DLVNPEVLQYAPATARIVNVGKRGGCQ 72

Query: 62  Q------QACYVRAYEQGIDVVRLHSGDPAIYGATAEQMRRLDALGIAYEVVPGVSSFTA 115
           Q      +   +   + G  VVRL  GDP I+G   E+   L A GI  EV+ G+SS  A
Sbjct: 73  QTPQEFIERLMLSEAQAGHCVVRLKGGDPFIFGRGGEEREHLQAAGIVVEVINGISSGLA 132

Query: 116 AAAAVSAELTKPEVSQSVILTRVSGR-ASAVPESESIASLAAHRATMCIFLSGPHLKKIV 174
           A A++   LT  + SQ  I     G+ A + P+ E++A L   + T+ I++      +I 
Sbjct: 133 APASIGVPLTHRDWSQGAIFITGHGKNAESNPDWETLAKL---KLTLVIYMGIARCAEIQ 189

Query: 175 TDLLL-HYPPETPVTLVYRAT 194
           + LL       TPV ++  AT
Sbjct: 190 SALLAGGKDGTTPVAVIQSAT 210


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 554,133
Number of extensions: 21044
Number of successful extensions: 80
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 2
Length of query: 258
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 177
Effective length of database: 921,564
Effective search space: 163116828
Effective search space used: 163116828
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)