BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2618.p
         (802 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980598|ref|YP_001353223.1| ATP-dependent Lon protease [Jan...  1509   0.0  

>gi|152980598|ref|YP_001353223.1| ATP-dependent Lon protease
           [Janthinobacterium sp. Marseille]
          Length = 804

 Score = 1509 bits (3907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 738/804 (91%), Positives = 780/804 (97%), Gaps = 2/804 (0%)

Query: 1   MTTPILTEQSQLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEQGKSIMLAAQKAAA 60
           MTT I TEQ+QLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEQGKSIMLAAQKAAA
Sbjct: 1   MTTTISTEQTQLPLLPLRDVVVFPHMVIPLFVGRPKSIKALEAAMEQGKSIMLAAQKAAA 60

Query: 61  KDEPSAEDIYEIGCVANILQMLKLPDGTVKVLVEGAQRARIHHISELETHFVADLTPVES 120
           KDEPSA+DIYEIGCVANILQMLKLPDGTVKVLVEGAQRARIHHISEL+THFVADLTP+ES
Sbjct: 61  KDEPSADDIYEIGCVANILQMLKLPDGTVKVLVEGAQRARIHHISELDTHFVADLTPIES 120

Query: 121 EQGDEAEVEAMRRTIVQQFDQYVKLNKKIPPEILTSLAGIDDAGRLADTIAAHLPLKLEQ 180
           E GDE+EVEAMRR IVQQFDQYVKLNKKIPPEILTSLAGIDDAGRLADTIAAHLPLKLEQ
Sbjct: 121 EAGDESEVEAMRRAIVQQFDQYVKLNKKIPPEILTSLAGIDDAGRLADTIAAHLPLKLEQ 180

Query: 181 KQVILEIFNVTKRYEHLLGQLEGELDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQK 240
           KQVILEIFNV KRYEHLLGQLEGELDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQK
Sbjct: 181 KQVILEIFNVAKRYEHLLGQLEGELDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQK 240

Query: 241 ELGEGEDGADLEELEKKIVAAKMPKEALEKAQSELKKLKLMSPMSAEATVVRNYIDTLVA 300
           ELGEGE+GADLE+LEKKI+AAKMPKEAL KAQ+ELKKLKLMSPMSAEATVVRNYIDTL+ 
Sbjct: 241 ELGEGEEGADLEDLEKKIIAAKMPKEALAKAQNELKKLKLMSPMSAEATVVRNYIDTLLG 300

Query: 301 LPWKKKSKVNNDLPNAEKVLEGDHYGLEKVKERILEYLAVQQRVDKLKAPILCFVGPPGV 360
           LPWKKKSKVNNDL NAEKVLE DHYGLEKVKERILEYLAVQQRVDKLKAPILCFVGPPGV
Sbjct: 301 LPWKKKSKVNNDLANAEKVLEDDHYGLEKVKERILEYLAVQQRVDKLKAPILCFVGPPGV 360

Query: 361 GKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRNPLF 420
           GKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSL+K GVRNPLF
Sbjct: 361 GKTSLGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLAKTGVRNPLF 420

Query: 421 LLDEIDKLGMDFRGDPSSALLEVLDPEQNHTFSDHYIEVDFDLSDVMFVATSNSFNIPPA 480
           LLDEIDKLGMDFRGDPSSALLEVLDPEQNHTFSDHY+EVDFDLSDVMFVATSNS+NIPPA
Sbjct: 421 LLDEIDKLGMDFRGDPSSALLEVLDPEQNHTFSDHYVEVDFDLSDVMFVATSNSYNIPPA 480

Query: 481 LLDRMEVIRLSGYTEDEKTSIAQRYLLPKQIKNNGLKEGEISVAESAIRDIIRYYTREAG 540
           LLDRMEVIRLSGYTEDEKTSIAQRYLLPKQIKNNGLKE EISVAESAIRDIIRYYTREAG
Sbjct: 481 LLDRMEVIRLSGYTEDEKTSIAQRYLLPKQIKNNGLKEDEISVAESAIRDIIRYYTREAG 540

Query: 541 VRSLEREVSKICRKVVKLLLLKKQEKKVTVTSRNLDKFLGVRRYDFGIAEKENQIGQVVG 600
           VRSLERE+SKICRKVVK+LLLKKQ++KVTV+++NLDKFLGVR++DFG+AEKENQIGQVVG
Sbjct: 541 VRSLEREISKICRKVVKMLLLKKQDRKVTVSTKNLDKFLGVRQFDFGVAEKENQIGQVVG 600

Query: 601 LAWTEVGGDLLTIEAVNMPGKGQIIRTGTLGDVMKESIEAARTVVRSRARKLGIKSEVFE 660
           LAWTEVGGDLLTIE++ MPGKG IIRTGTLGDVMKESIEAARTVVRSRA+KLGIK+++FE
Sbjct: 601 LAWTEVGGDLLTIESMAMPGKGGIIRTGTLGDVMKESIEAARTVVRSRAKKLGIKADIFE 660

Query: 661 KSDIHIHVPEGATPKDGPSAGIAMTTALVSIFSGIPVRADVAMTGEITLRGEVLPIGGLK 720
           KSDIHIHVPEGATPKDGPSAG+AMT A+VS+F+GIPVRADVAMTGEITLRGEVLPIGGLK
Sbjct: 661 KSDIHIHVPEGATPKDGPSAGVAMTLAMVSVFTGIPVRADVAMTGEITLRGEVLPIGGLK 720

Query: 721 EKLLAAHRGGIKTVLIPEQNVKDLAEIPDNVKNKLEIIPVRWIDKVLEVALERQPVPLSE 780
           EKLLAAHRGGIKTVLIPEQNVKDLAEIPD+VKNKLEI+PVRWIDKVLE+ALER PVPL++
Sbjct: 721 EKLLAAHRGGIKTVLIPEQNVKDLAEIPDSVKNKLEIVPVRWIDKVLEIALERAPVPLTD 780

Query: 781 DE-AIVEAAVAPKEGATDP-VVKH 802
           +E A+V+  VA    + DP VVKH
Sbjct: 781 EEVAVVDTTVAKPAESNDPNVVKH 804


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.316    0.135    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,682,419
Number of extensions: 68508
Number of successful extensions: 286
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 286
Number of HSP's successfully gapped: 1
Length of query: 802
Length of database: 1,221,021
Length adjustment: 91
Effective length of query: 711
Effective length of database: 884,594
Effective search space: 628946334
Effective search space used: 628946334
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 133 (55.8 bits)