BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2586.p
         (260 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase [Janthinoba...   148   3e-37
gi|152982214|ref|YP_001353072.1| enoyl-CoA hydratase [Janthinoba...    81   7e-17

>gi|152980360|ref|YP_001351930.1| enoyl-CoA hydratase
           [Janthinobacterium sp. Marseille]
          Length = 258

 Score =  148 bits (373), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 136/262 (51%), Gaps = 11/262 (4%)

Query: 4   YTNLKLEKHGHTAVLTLSNPPA-NTWTRQALSDLTRLVKELNAEREIYTLVVTGEGEKFF 62
           Y N+ +E HG   V+TL+ P A N    + + +L   ++  + + +I  +++TG  EK F
Sbjct: 3   YENILVEIHGKVGVITLNRPAALNALNDKLMDELGLALQSFDGDDDIGCMIITGS-EKAF 61

Query: 63  SAGADLKLFADGDKAMAREMARRFGEAF----ETLSSFRGVSIAAINGYAMGGGLECALA 118
           +AGAD+     G  A    M    G+      E + S R   IAA+ GYA+GGG E A+ 
Sbjct: 62  AAGADI-----GAMATYTYMDVYKGDYITRNWEQIRSVRKPVIAAVAGYALGGGCELAMM 116

Query: 119 CDIRIAEEQAQMALPEAAVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVNAETALRIGL 178
           CD  IA + A+   PE  +G++P AGGTQ LP  V +  A  + L    ++A  A R GL
Sbjct: 117 CDFIIAADTAKFGQPEIKLGIIPGAGGTQRLPRAVSKSKAMDLCLTARMMDAAEAERAGL 176

Query: 179 VEEVVPRGQARERALALAQQAQKQSPSSVAASKKLIQGARHNPLGTILQTERELFVDLFD 238
           V  VV   +  E ALA A      S   V   K+ I  A    L   +Q ER LF   F 
Sbjct: 177 VSRVVAADKLHEEALAAATVIANMSLPMVMMVKESINRAYETTLAEGVQFERRLFHSTFA 236

Query: 239 TQDQQEGVQAFLEKRPPQWKNA 260
           T DQ+EG+QAF+EKR   +KN+
Sbjct: 237 TADQKEGMQAFIEKRAAHFKNS 258


>gi|152982214|ref|YP_001353072.1| enoyl-CoA hydratase
           [Janthinobacterium sp. Marseille]
          Length = 269

 Score = 80.9 bits (198), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 7   LKLEKHGHTAVLTLSNPPA-NTWTRQALSDLTRLVKELNAEREIYTLVVTGEGEKFFSAG 65
           ++  +H  T +LT+SNP A N       +    ++     +  I  +++TG  + FF AG
Sbjct: 15  IQASRHEATLILTISNPGAKNALHPDMFAAAVEVLSTAERDDSIRAVILTG-ADNFFCAG 73

Query: 66  ADLKLFADG---DKAMAREMARRFGEAFETLSSFRGVSIAAINGYAMGGGLECALACDIR 122
            +L    +    DK+   +         E +       IAA+ G A G G   ALACD+ 
Sbjct: 74  GNLNKLLEHRAIDKSQQGDAVDSLRSWIEAIRDCPKPVIAAVEGAAAGAGFSLALACDLI 133

Query: 123 IAEEQAQMALPEAAVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVNAETALRIGLVEEV 182
           +A   ++ A+  + VGL P  G +  L   +    A  ++L G+ V A     +GL+  +
Sbjct: 134 VAGNNSKFAMSYSRVGLTPDGGASWFLTQALPRQLATEILLEGKAVAATRLHELGLINRL 193

Query: 183 VPRGQARERALALAQQAQKQSPSSVAASKKLIQGARHNPLGTILQTERELFVDLFDTQDQ 242
           V  G   + A   A +  + S  +V   K L++    N L    ++E+  FV+  + +D 
Sbjct: 194 VADGTTLDAAQQWADELAELSGHAVERIKSLVREGGSNTLAQHFESEKFHFVESLNHRDA 253

Query: 243 QEGVQAFLEKRPPQWK 258
            EG+ AFLEKR P +K
Sbjct: 254 LEGINAFLEKRKPHYK 269


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.132    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 569,054
Number of extensions: 22081
Number of successful extensions: 85
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 3
Length of query: 260
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 179
Effective length of database: 921,564
Effective search space: 164959956
Effective search space used: 164959956
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)