BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2567.p (286 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981003|ref|YP_001354996.1| pirin family protein [Janthinob... 172 3e-44 gi|152981110|ref|YP_001355191.1| pirin-related protein [Janthino... 120 1e-28 gi|152982989|ref|YP_001354503.1| pirin-like protein [Janthinobac... 96 3e-21 gi|152981404|ref|YP_001352221.1| pirin-related protein [Janthino... 67 9e-13 >gi|152981003|ref|YP_001354996.1| pirin family protein [Janthinobacterium sp. Marseille] Length = 288 Score = 172 bits (435), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 109/263 (41%), Positives = 148/263 (56%), Gaps = 24/263 (9%) Query: 36 RRLDPFLMLD-AFHSD-EPSDYLAGFPDHPHRGFETVTYMLAGRMRHRDNAGNEGLLEPG 93 ++L PFL+LD A +D P+ G HPHRGFETVT + G + HRD+ G G++ PG Sbjct: 33 KQLSPFLLLDYAGPADFSPAQRPPGVGSHPHRGFETVTIVYKGEVEHRDSTGQGGVIGPG 92 Query: 94 GMQWMTAGRGLVHSELPEQ----EDGLMSGFQLWVNLAAKDKMTTPGYQ-----DIPAAG 144 +QWMTAG G++H E Q G + QLWVNL AKDKMT PGYQ DIPA Sbjct: 93 DVQWMTAGAGILHEEFHSQAFTRSGGALEMVQLWVNLPAKDKMTAPGYQAIVDRDIPAVA 152 Query: 145 IPETSPQPGVKVRVLAGSAFGVDGAIRRETTEPLY-LDLHLEAGVTLDLPIAATHNAFLY 203 +P+ + VRV+AG G G T P++ LD+ L G +LP+ N+ L Sbjct: 153 MPDGAG----TVRVIAGEYQGHAGP--AHTFTPMHVLDVRLNQGSVAELPVPDGWNSALI 206 Query: 204 VYEGRLAVGPQGSEARLAEAGRMALLSNVADAAGVTVRAEQASRFLLIAGRPLNEPIAQW 263 V G + V + +A +M LL + +T+ A + LLI+G P++E I Sbjct: 207 VLRGTVLVNGEA----VARDAQMVLLDRA--GSNLTIEANSDAVVLLISGEPIDEAIVGH 260 Query: 264 GPFVMNTREQVEEAIDDFRAGRF 286 GPFVMNT E++ +AIDDF +GRF Sbjct: 261 GPFVMNTHEEIVQAIDDFNSGRF 283 >gi|152981110|ref|YP_001355191.1| pirin-related protein [Janthinobacterium sp. Marseille] Length = 305 Score = 120 bits (300), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/276 (31%), Positives = 133/276 (48%), Gaps = 23/276 (8%) Query: 21 GAGVSLTRVLTHDLQRRLDPFLMLDAFHSDEPSDYLAG----FPDHPHRGFETVTYMLAG 76 G + R L +R + PF+ LD P + AG HPH G TVTY+ G Sbjct: 20 GDNFEVRRALPTSQKRMVGPFVFLDQMG---PHVFTAGHGLDVRPHPHIGLATVTYLFDG 76 Query: 77 RMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELP----EQEDGLMSGFQLWVNLAAKDKM 132 + HRD+ G+ ++PG + WMTAG G+VHSE Q + G Q WV L K + Sbjct: 77 EIEHRDSVGSIQTIQPGAVNWMTAGSGIVHSERTGKALRQSGSSLEGLQCWVALPRKHEE 136 Query: 133 TTPGYQDIPAAGIPETSPQPGVKVRVLAGSAFGVDGAIRRETTEPLYLDLHLEAGVTLDL 192 T PG+ + A +P + G +++AGS FG + ++ Y+D+ L LD+ Sbjct: 137 TDPGFVHVAANALPIIEGE-GASAKIIAGSFFGKSSPV-PTLSDLFYVDVQLAPKARLDV 194 Query: 193 PIAATHNAFLYVYEGRLAVGPQGSEARLAEAGRMALLSNVADAAGVTVR--AEQASRFLL 250 P A +YV EG+L +G G + L +N A VT+R +R +L Sbjct: 195 PAEYPEQA-IYVVEGQLDLGRDGV---FGPGQLLVLRANTA----VTLRNSGTATTRLML 246 Query: 251 IAGRPLNEPIAQWGPFVMNTREQVEEAIDDFRAGRF 286 + G P++ FV ++ E++E+A +D+R RF Sbjct: 247 LGGEPMDGSRYLVWNFVSSSIERLEQAKEDWRLQRF 282 >gi|152982989|ref|YP_001354503.1| pirin-like protein [Janthinobacterium sp. Marseille] Length = 296 Score = 95.9 bits (237), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/254 (30%), Positives = 114/254 (44%), Gaps = 17/254 (6%) Query: 38 LDPFLMLDAFHSDEPSDYLAGFPDHPHRGFETVTYMLA---GRMRHRDNAGNEGLLEPGG 94 +DP LM+D F P+ F H H G VT M G +RD G+ L+ G Sbjct: 50 MDPLLMVDDFVMTAPT-----FEPHLHAGISAVTAMFEDSEGAFINRDTLGHNIGLQAGD 104 Query: 95 MQWMTAGRGLVHSELPEQEDGLMSGFQLWVNLAAKDKMTTPGYQDIPAAGIPETSPQPGV 154 + W+TA G VH E PE E + Q++VNL A K + A +P G Sbjct: 105 LYWLTAASGAVHEEHPE-EGARIHALQIFVNLPAHLKKEGARALHVKAGEVPLLEGN-GY 162 Query: 155 KVRVLAGSAFGVDGAIRRETTEPLYLDLHLEAGVTLDLPIAATHNAFLYVYEGRLAVGPQ 214 ++RVL G + V G+ R + LD +E G + A++Y G L + Sbjct: 163 RMRVLLGRSATVVGS-ERTPPDMTMLDGLMEKGACFAHHLLGEQQAWIYAASGSLTI-RC 220 Query: 215 GSEARLAEAGRMALLSNVADAAGVTV--RAEQASRFLLIAGRPLNEPIAQWGPFVMNTRE 272 G E R +AG + + AG+ V + + S F+ IAGRP+ EP + GP VM+T Sbjct: 221 GDENRTLKAGSA---TTIRAGAGIEVVFNSSEPSHFVFIAGRPVAEPFIKHGPLVMSTVA 277 Query: 273 QVEEAIDDFRAGRF 286 + + + G F Sbjct: 278 DIRRTLVGYANGEF 291 >gi|152981404|ref|YP_001352221.1| pirin-related protein [Janthinobacterium sp. Marseille] Length = 232 Score = 67.4 bits (163), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 9/154 (5%) Query: 58 GFPDHPHRGFETVTYMLAGRMRHRDNAGNEGLLEPGGMQWMTAGRGLVHSELPEQEDGLM 117 GF H HR E ++Y+L G + H+D+ G ++ PG +Q M+AG G+ HSE ++ Sbjct: 53 GFGTHGHRDMEIISYVLEGELAHKDSMGTGSVIRPGDVQRMSAGSGVRHSEFNHSKEQTT 112 Query: 118 SGFQLWVNLAAKDKMTTPGYQDIPAAGIPETSPQPGVKVRVLAGSAFGVDGAIRRETTEP 177 Q+W+ P Y++ A + + ++R++A S G DG++ Sbjct: 113 HFLQIWIQPNVNG--IPPSYEEKHFA-----AEEKRGRLRLIA-SEDGTDGSVLIHQDAK 164 Query: 178 LYLDLHLEAGVTLDLPIAATHNAFLYVYEGRLAV 211 LY L + T +L +A AF+++ G + V Sbjct: 165 LYAGL-FDGAETAELTLAKGRRAFVHIARGSVTV 197 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.319 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 746,213 Number of extensions: 33685 Number of successful extensions: 92 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 86 Number of HSP's successfully gapped: 4 Length of query: 286 Length of database: 1,221,021 Length adjustment: 82 Effective length of query: 204 Effective length of database: 917,867 Effective search space: 187244868 Effective search space used: 187244868 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)