BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2566.p (292 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981110|ref|YP_001355191.1| pirin-related protein [Janthino... 254 5e-69 gi|152981003|ref|YP_001354996.1| pirin family protein [Janthinob... 112 2e-26 gi|152982989|ref|YP_001354503.1| pirin-like protein [Janthinobac... 66 3e-12 gi|152981404|ref|YP_001352221.1| pirin-related protein [Janthino... 64 1e-11 >gi|152981110|ref|YP_001355191.1| pirin-related protein [Janthinobacterium sp. Marseille] Length = 305 Score = 254 bits (648), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 144/285 (50%), Positives = 178/285 (62%), Gaps = 11/285 (3%) Query: 12 TRDIG--FPVRRLLPAAAARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHIGLATVTYLF 69 TRD+G F VRR LP + R VGPFVF D MGP F AG DVRPHPHIGLATVTYLF Sbjct: 16 TRDLGDNFEVRRALPTSQKRMVGPFVFLDQMGPHVFTAGHGL-DVRPHPHIGLATVTYLF 74 Query: 70 SGAMMHRDSLGVVQRITPGAVNWMAAGRGIVHSERIPDDIREQKVPVHGLQMWVALPAEQ 129 G + HRDS+G +Q I PGAVNWM AG GIVHSER +R+ + GLQ WVALP + Sbjct: 75 DGEIEHRDSVGSIQTIQPGAVNWMTAGSGIVHSERTGKALRQSGSSLEGLQCWVALPRKH 134 Query: 130 EEGEPLFRHYAAQEMPETTVGGARLHVLAGSAFGVSSPVITASPTLYVAGSTTDGAELEI 189 EE +P F H AA +P GA ++AGS FG SSPV T S YV A L++ Sbjct: 135 EETDPGFVHVAANALPIIEGEGASAKIIAGSFFGKSSPVPTLSDLFYVDVQLAPKARLDV 194 Query: 190 AAEVQERALYVVRGDVTL--DGERLEAGTLAILQPGASVAFKAVGESV--FMILGGAPLD 245 AE E+A+YVV G + L DG G L +L+ +V + G + M+LGG P+D Sbjct: 195 PAEYPEQAIYVVEGQLDLGRDGV-FGPGQLLVLRANTAVTLRNSGTATTRLMLLGGEPMD 253 Query: 246 GPRFVWWNFVATSRDKIEAAKEAWNSRNKQVFPDIPGETEWIPLP 290 G R++ WNFV++S +++E AKE W Q F +PGETE+IPLP Sbjct: 254 GSRYLVWNFVSSSIERLEQAKEDW---RLQRFAAVPGETEFIPLP 295 >gi|152981003|ref|YP_001354996.1| pirin family protein [Janthinobacterium sp. Marseille] Length = 288 Score = 112 bits (280), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 6/262 (2%) Query: 16 GFPVRRLLPAAA-ARTVGPFVFFDHMGPVEFDAGTTEGDVRPHPHIGLATVTYLFSGAMM 74 GFPVR + + + + PF+ D+ GP +F V HPH G TVT ++ G + Sbjct: 19 GFPVRSMFSYQSHGKQLSPFLLLDYAGPADFSPAQRPPGVGSHPHRGFETVTIVYKGEVE 78 Query: 75 HRDSLGVVQRITPGAVNWMAAGRGIVHSERIPDDIREQKVPVHGLQMWVALPAEQEEGEP 134 HRDS G I PG V WM AG GI+H E + +Q+WV LPA+ + P Sbjct: 79 HRDSTGQGGVIGPGDVQWMTAGAGILHEEFHSQAFTRSGGALEMVQLWVNLPAKDKMTAP 138 Query: 135 LFRHYAAQEMPETTV--GGARLHVLAGSAFGVSSPVITASPTLYVAGSTTDGAELEI-AA 191 ++ +++P + G + V+AG G + P T +P + G+ E+ Sbjct: 139 GYQAIVDRDIPAVAMPDGAGTVRVIAGEYQGHAGPAHTFTPMHVLDVRLNQGSVAELPVP 198 Query: 192 EVQERALYVVRGDVTLDGERL--EAGTLAILQPGASVAFKAVGESVFMILGGAPLDGPRF 249 + AL V+RG V ++GE + +A + + + G+++ +A ++V +++ G P+D Sbjct: 199 DGWNSALIVLRGTVLVNGEAVARDAQMVLLDRAGSNLTIEANSDAVVLLISGEPIDEAIV 258 Query: 250 VWWNFVATSRDKIEAAKEAWNS 271 FV + ++I A + +NS Sbjct: 259 GHGPFVMNTHEEIVQAIDDFNS 280 >gi|152982989|ref|YP_001354503.1| pirin-like protein [Janthinobacterium sp. Marseille] Length = 296 Score = 65.9 bits (159), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 15/202 (7%) Query: 56 PHPHIGLATVTYLFS---GAMMHRDSLGVVQRITPGAVNWMAAGRGIVHSERIPDDIREQ 112 PH H G++ VT +F GA ++RD+LG + G + W+ A G VH E E+ Sbjct: 68 PHLHAGISAVTAMFEDSEGAFINRDTLGHNIGLQAGDLYWLTAASGAVHEEH-----PEE 122 Query: 113 KVPVHGLQMWVALPAEQEEGEPLFRHYAAQEMPETTVGGARLHVLAGSAFGVSSPVITAS 172 +H LQ++V LPA ++ H A E+P G R+ VL G + V T Sbjct: 123 GARIHALQIFVNLPAHLKKEGARALHVKAGEVPLLEGNGYRMRVLLGRSATVVGSERTPP 182 Query: 173 PTLYVAGSTTDGAELEIAAEVQERA-LYVVRGDVTL----DGERLEAGTLAILQPGA--S 225 + G GA +++A +Y G +T+ + L+AG+ ++ GA Sbjct: 183 DMTMLDGLMEKGACFAHHLLGEQQAWIYAASGSLTIRCGDENRTLKAGSATTIRAGAGIE 242 Query: 226 VAFKAVGESVFMILGGAPLDGP 247 V F + S F+ + G P+ P Sbjct: 243 VVFNSSEPSHFVFIAGRPVAEP 264 >gi|152981404|ref|YP_001352221.1| pirin-related protein [Janthinobacterium sp. Marseille] Length = 232 Score = 63.5 bits (153), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 24/166 (14%) Query: 57 HPHIGLATVTYLFSGAMMHRDSLGVVQRITPGAVNWMAAGRGIVHSERIPDDIREQKVPV 116 H H + ++Y+ G + H+DS+G I PG V M+AG G+ HSE + +EQ Sbjct: 57 HGHRDMEIISYVLEGELAHKDSMGTGSVIRPGDVQRMSAGSGVRHSE--FNHSKEQ--TT 112 Query: 117 HGLQMWV-----ALPAEQEEGEPLFRHYAAQEMPETTVGGARLHVLAGSAFGVSSPVITA 171 H LQ+W+ +P EE +H+AA+E RL ++A S +I Sbjct: 113 HFLQIWIQPNVNGIPPSYEE-----KHFAAEEKR------GRLRLIASEDGTDGSVLIHQ 161 Query: 172 SPTLYVAGSTTDGAEL-EIAAEVQERAL-YVVRGDVTLDGERLEAG 215 LY DGAE E+ RA ++ RG VT++G L+ G Sbjct: 162 DAKLYAG--LFDGAETAELTLAKGRRAFVHIARGSVTVNGVALKTG 205 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.320 0.136 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 761,033 Number of extensions: 33297 Number of successful extensions: 93 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 87 Number of HSP's successfully gapped: 4 Length of query: 292 Length of database: 1,221,021 Length adjustment: 82 Effective length of query: 210 Effective length of database: 917,867 Effective search space: 192752070 Effective search space used: 192752070 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)