BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2531.p
         (176 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982734|ref|YP_001353342.1| inosine-5'-monophosphate dehydr...   100   6e-23

>gi|152982734|ref|YP_001353342.1| inosine-5'-monophosphate
           dehydrogenase [Janthinobacterium sp. Marseille]
          Length = 139

 Score =  100 bits (248), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 90/139 (64%), Gaps = 3/139 (2%)

Query: 6   TIADVMTRGAHTLSPDDSVIHAAQAMEALDVGALPVCDAQHNLVGLVTDRDIVLRAVAPH 65
           T+ + M      +SP+ ++  AA+ M+  + G LPV +    ++G ++DRDIV+RAVA  
Sbjct: 3   TLKEFMKHDVQVISPEATIQDAAKKMKEGNFGMLPVHE-NDRMIGSISDRDIVIRAVAEG 61

Query: 66  RLTDTLPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125
           + + T  + +VM+  ++W +ED  + + +  M Q Q+RRLP+++ QK LVG+V++GDVA 
Sbjct: 62  KPSST-KVRDVMTKGIVWAFEDSSLSEGVRLMSQHQVRRLPIVNSQKRLVGIVAIGDVAV 120

Query: 126 K-TQNRGVGEALAEISLPA 143
           + ++   VGE L+EIS PA
Sbjct: 121 ESSEFEVVGETLSEISEPA 139


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.132    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 422,838
Number of extensions: 17227
Number of successful extensions: 63
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 1,221,021
Length adjustment: 77
Effective length of query: 99
Effective length of database: 936,352
Effective search space: 92698848
Effective search space used: 92698848
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)