BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2475.p
         (294 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980841|ref|YP_001353996.1| metallo-beta-lactamase superfam...   358   e-100
gi|152983004|ref|YP_001354751.1| hypothetical protein mma_3061 [...    99   3e-22

>gi|152980841|ref|YP_001353996.1| metallo-beta-lactamase superfamily
           protein [Janthinobacterium sp. Marseille]
          Length = 288

 Score =  358 bits (919), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/286 (60%), Positives = 212/286 (74%), Gaps = 4/286 (1%)

Query: 9   IEGYFDPATSTVSYLVLDRASGQCALIDSVLDYDPKSGRTATRSADQLIARVEALGARVQ 68
           +  +FD  T TVSY+V       CA+IDSVLDYDPKSG T+T SAD++I  V   G  V+
Sbjct: 5   VHAFFDNETGTVSYVVHAAQESACAIIDSVLDYDPKSGHTSTGSADKVIQFVRQQGLAVE 64

Query: 69  WILETHAHADHLSAAPYLKQKLGGRIAIGEHIRQVQQVFGRLFNAGTEFEHDGSQFDHLF 128
           WILETHAHADHLSAAPY+KQKLGGRIAIG  I +VQ+VF  +FN    F+ DGSQFDHLF
Sbjct: 65  WILETHAHADHLSAAPYIKQKLGGRIAIGRMITKVQRVFDEIFNLEDSFKFDGSQFDHLF 124

Query: 129 ADGETFLIGQLPARVMHTPGHTPACLTYVVEAAGEIAAFVGDTLFMPDYGTARCDFPGGD 188
            + E F IG+L A+ ++ PGHTPA + Y +   G+ A FVGDTLFMPD GTARCDFPGGD
Sbjct: 125 EEDEIFHIGKLQAQALYVPGHTPADMAYHI---GD-AIFVGDTLFMPDAGTARCDFPGGD 180

Query: 189 ARRLYQSIHAVLALPPATRLYMCHDYQPNGRELRFVTTVAEERQHNIHVHEGISEDDFVA 248
           A  +Y+SI  +L+ P  TRL+MCHDY PN R   + TTV  +R  NIH+  GIS D+FVA
Sbjct: 181 AHTMYRSIQKILSFPDQTRLFMCHDYPPNERAPAWETTVVRQRTTNIHIRTGISADEFVA 240

Query: 249 MRSARDATLDMPVLLLPSVQVNMRAGQMPPPEANGVRYLKIPLNAV 294
           MR+ARD TL MP L+LP++QVN+RAG +PP + NG+RYLKIPLN +
Sbjct: 241 MRTARDKTLGMPTLILPAIQVNIRAGNLPPADDNGIRYLKIPLNTL 286


>gi|152983004|ref|YP_001354751.1| hypothetical protein mma_3061
           [Janthinobacterium sp. Marseille]
          Length = 249

 Score = 99.0 bits (245), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 44/266 (16%)

Query: 13  FDPATSTVSYLVLDRASGQCALIDSVLDYDPKSGRTATRSADQLIARVEALGARVQWILE 72
           ++P +ST +YL+ D  +G+  LID V+            + ++ +A V  LG ++ + ++
Sbjct: 7   YEPLSSTYTYLLGDEQTGRAILIDPVIS-----------TMERDLAEVHRLGLKLAYTVD 55

Query: 73  THAHADHLSAAPYLKQKLGGRIAIGEHIRQVQQVFGRLFNAGTEFEHDGSQFDHLFADGE 132
           TH HADH++ A  LK+ +G +IA   H                    + S  D    +G+
Sbjct: 56  THIHADHITGALELKRAVGSKIATPAH-------------------DNLSCTDIGIEEGK 96

Query: 133 TFLIGQLPARVMHTPGHTPACLTYVVEAAGEIAAFVGDTLFMPDYGTARCDFPGGDARRL 192
            F +  +    +HTPGHT    +Y+         F GD L +   G  R DF  GDA  L
Sbjct: 97  PFQVDGITLHPLHTPGHTEGHFSYLFND----RVFTGDALLIE--GCGRTDFQNGDADAL 150

Query: 193 YQSI-HAVLALPPATRLYMCHDYQPNGRELRFVTTVAEERQHNIHVHEGISEDDFVAMRS 251
           Y+S+   + +LP  T +Y  HDY+      RFV+++A+E+  N  + +  + ++F  + +
Sbjct: 151 YKSVKEKLFSLPDETLVYPSHDYKQ-----RFVSSIAQEKARNPRLGDNKTLEEFKHIMA 205

Query: 252 ARDATLDMPVLLLPSVQVNMRAGQMP 277
             +  L  P  +  +V  N + G  P
Sbjct: 206 --NLNLPYPKFIDYAVLGNQQCGVCP 229


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 731,735
Number of extensions: 30652
Number of successful extensions: 94
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 88
Number of HSP's successfully gapped: 2
Length of query: 294
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 211
Effective length of database: 914,170
Effective search space: 192889870
Effective search space used: 192889870
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)