BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2474.p
         (142 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152983125|ref|YP_001354748.1| hypothetical protein mma_3058 [...   162   9e-42
gi|152982116|ref|YP_001352149.1| hypothetical protein mma_0459 [...   159   6e-41

>gi|152983125|ref|YP_001354748.1| hypothetical protein mma_3058
           [Janthinobacterium sp. Marseille]
          Length = 145

 Score =  162 bits (409), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 86/128 (67%), Positives = 101/128 (78%)

Query: 11  VAGLIFGLGLIVSGMANPAKVLGFLDLAGAWDPSLALVMAGAIGIGVPAFAWARKRQQSL 70
           +AGL+FGLGLI+SGMA+P+KVLGFLDLAG WDPSLA VM GA+ +G  AF +A KR QSL
Sbjct: 8   LAGLVFGLGLIISGMADPSKVLGFLDLAGNWDPSLAFVMGGALLVGSLAFPFAVKRPQSL 67

Query: 71  LGAPLQLPSATGIDRRLVLGSLLFGVGWGMAGICPGPALVLLGMGSLKGLAFVLAMLAGM 130
           LG  ++LP+AT IDRRLVLGSL FGVGWG+AG CPGPALV L  G  K L F  AM+ GM
Sbjct: 68  LGEAMRLPTATKIDRRLVLGSLTFGVGWGLAGYCPGPALVSLSQGGAKPLLFFFAMIVGM 127

Query: 131 KLFGWLQR 138
            +F  L+R
Sbjct: 128 LIFELLER 135


>gi|152982116|ref|YP_001352149.1| hypothetical protein mma_0459
           [Janthinobacterium sp. Marseille]
          Length = 140

 Score =  159 bits (403), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 102/132 (77%)

Query: 7   LSAGVAGLIFGLGLIVSGMANPAKVLGFLDLAGAWDPSLALVMAGAIGIGVPAFAWARKR 66
           L A +AGL+FG+GLI+SGMANPAKV+GFLDLAG WDPSLA VM GAI +G+ AF  A KR
Sbjct: 4   LMALLAGLVFGIGLIISGMANPAKVIGFLDLAGKWDPSLAFVMGGAILVGLFAFRLATKR 63

Query: 67  QQSLLGAPLQLPSATGIDRRLVLGSLLFGVGWGMAGICPGPALVLLGMGSLKGLAFVLAM 126
            ++LLG PL+LP A  IDRRL+LG L FGVGWG+AG CPGPAL  L +G  K + FV AM
Sbjct: 64  SKTLLGDPLRLPQAKQIDRRLILGGLAFGVGWGLAGYCPGPALASLVIGHSKTVIFVTAM 123

Query: 127 LAGMKLFGWLQR 138
           + GM +F  L+R
Sbjct: 124 VLGMAIFELLER 135


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.326    0.144    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 388,140
Number of extensions: 18151
Number of successful extensions: 99
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 2
Length of query: 142
Length of database: 1,221,021
Length adjustment: 75
Effective length of query: 67
Effective length of database: 943,746
Effective search space: 63230982
Effective search space used: 63230982
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 125 (52.8 bits)