BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2464.p
         (291 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980841|ref|YP_001353996.1| metallo-beta-lactamase superfam...   367   e-103
gi|152983004|ref|YP_001354751.1| hypothetical protein mma_3061 [...   103   1e-23

>gi|152980841|ref|YP_001353996.1| metallo-beta-lactamase superfamily
           protein [Janthinobacterium sp. Marseille]
          Length = 288

 Score =  367 bits (942), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/286 (61%), Positives = 214/286 (74%), Gaps = 4/286 (1%)

Query: 6   IEGHFDPATSTVSYIVLDRATGQCALLDSVLDYDPKSGRTSTTSADLLIQRVNDLGATVQ 65
           +   FD  T TVSY+V       CA++DSVLDYDPKSG TST SAD +IQ V   G  V+
Sbjct: 5   VHAFFDNETGTVSYVVHAAQESACAIIDSVLDYDPKSGHTSTGSADKVIQFVRQQGLAVE 64

Query: 66  WILETHAHADHLSAAPYLKRKLGGRIAIGEHIRQVQDVFGTLFNAGAQFEHDGSQFDHLF 125
           WILETHAHADHLSAAPY+K+KLGGRIAIG  I +VQ VF  +FN    F+ DGSQFDHLF
Sbjct: 65  WILETHAHADHLSAAPYIKQKLGGRIAIGRMITKVQRVFDEIFNLEDSFKFDGSQFDHLF 124

Query: 126 VDGERFQIGNLKARVMHTPGHTPACITYVVEEGAQVAAFVGDTLFMPDYGTARCDFPGGN 185
            + E F IG L+A+ ++ PGHTPA + Y + +    A FVGDTLFMPD GTARCDFPGG+
Sbjct: 125 EEDEIFHIGKLQAQALYVPGHTPADMAYHIGD----AIFVGDTLFMPDAGTARCDFPGGD 180

Query: 186 ARTLFHSINDVLSLPAHTRLYLCHDYQPNGRALQFVTTVAEQRQSNVHVRDGISEEEFVA 245
           A T++ SI  +LS P  TRL++CHDY PN RA  + TTV  QR +N+H+R GIS +EFVA
Sbjct: 181 AHTMYRSIQKILSFPDQTRLFMCHDYPPNERAPAWETTVVRQRTTNIHIRTGISADEFVA 240

Query: 246 MRSARDATLAMPVLLLPSVQVNMRAGQLPPAEANGVRYLKIPLNTV 291
           MR+ARD TL MP L+LP++QVN+RAG LPPA+ NG+RYLKIPLNT+
Sbjct: 241 MRTARDKTLGMPTLILPAIQVNIRAGNLPPADDNGIRYLKIPLNTL 286


>gi|152983004|ref|YP_001354751.1| hypothetical protein mma_3061
           [Janthinobacterium sp. Marseille]
          Length = 249

 Score =  103 bits (257), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 44/266 (16%)

Query: 10  FDPATSTVSYIVLDRATGQCALLDSVLDYDPKSGRTSTTSADLLIQRVNDLGATVQWILE 69
           ++P +ST +Y++ D  TG+  L+D V+         ST   DL    V+ LG  + + ++
Sbjct: 7   YEPLSSTYTYLLGDEQTGRAILIDPVI---------STMERDL--AEVHRLGLKLAYTVD 55

Query: 70  THAHADHLSAAPYLKRKLGGRIAIGEHIRQVQDVFGTLFNAGAQFEHDGSQFDHLFVDGE 129
           TH HADH++ A  LKR +G +IA   H                    + S  D    +G+
Sbjct: 56  THIHADHITGALELKRAVGSKIATPAH-------------------DNLSCTDIGIEEGK 96

Query: 130 RFQIGNLKARVMHTPGHTPACITYVVEEGAQVAAFVGDTLFMPDYGTARCDFPGGNARTL 189
            FQ+  +    +HTPGHT    +Y+  +      F GD L +   G  R DF  G+A  L
Sbjct: 97  PFQVDGITLHPLHTPGHTEGHFSYLFND----RVFTGDALLIE--GCGRTDFQNGDADAL 150

Query: 190 FHSINDVL-SLPAHTRLYLCHDYQPNGRALQFVTTVAEQRQSNVHVRDGISEEEFVAMRS 248
           + S+ + L SLP  T +Y  HDY+      +FV+++A+++  N  + D  + EEF  + +
Sbjct: 151 YKSVKEKLFSLPDETLVYPSHDYKQ-----RFVSSIAQEKARNPRLGDNKTLEEFKHIMA 205

Query: 249 ARDATLAMPVLLLPSVQVNMRAGQLP 274
             +  L  P  +  +V  N + G  P
Sbjct: 206 --NLNLPYPKFIDYAVLGNQQCGVCP 229


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 702,788
Number of extensions: 28795
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 2
Length of query: 291
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 209
Effective length of database: 917,867
Effective search space: 191834203
Effective search space used: 191834203
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)