BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2446.p (485 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transami... 206 3e-54 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 147 1e-36 gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 140 3e-34 gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 129 3e-31 gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate... 102 6e-23 >gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transaminase [Janthinobacterium sp. Marseille] Length = 439 Score = 206 bits (523), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 142/438 (32%), Positives = 223/438 (50%), Gaps = 30/438 (6%) Query: 48 LPFEDHKFLQPEHVRVIVRGQGLYVWDDHGRRLLDGMSGLWCTTLGYGRQELVAAATRQM 107 +PF ++ + + R++V G+Y D GR++LDG +GLWC G+G ++ A +Q Sbjct: 12 MPFTANRQFKAKP-RMLVAASGMYYTSDDGRQILDGTAGLWCVNAGHGHPKITEAIQKQA 70 Query: 108 TTLSYCSQFFNTAHPTLAELSARLFELLPAHYSRILYCNSGSEANEILIKVVRRYWELAG 167 ++ Y + F HP E + L E+ PA +R+ +CN GSE + +K+ Y + G Sbjct: 71 ASMDY-APLFQIGHPLAFEAATALAEIAPAGLNRVFFCNDGSEGVDTALKIALAYHRIRG 129 Query: 168 RTSKRVIIGRHNGYHGSTVGSASLGGMKIMHALGASMLPEVQHIEQPFWFGYDG-----P 222 + +IGR YHG G ++GG+ L H+ P + P Sbjct: 130 DAGRTRLIGRERAYHGVGFGGIAVGGIAGNRKQFGPGL-AADHLRHPLDIAKNAYSRGLP 188 Query: 223 LNEVEFGLHAAQALERKIIEL-GADNVAAFVAEPFQGAGGMIFPPDNYWPEIQRICQRHE 281 L+ E A LE++++ L VAA + EP QG+ G+I PP Y +++ IC +H Sbjct: 189 LHGAEM----ADELEQRLLALHDPSTVAAVIVEPLQGSTGVILPPKGYLEKLRVICDKHG 244 Query: 282 VLLCADEVIGGFGRTGHWFAHEYFGFQPDLLTIAKGLTSGYVPMGGLVLSERVGETL--- 338 VLL DEVI GFGR G F ++FG +PD++ AK LT+ VPMG +++ E++ ET Sbjct: 245 VLLIFDEVITGFGRLGTAFGADFFGVKPDMIVCAKALTNAAVPMGAVIVHEKIHETFMQM 304 Query: 339 --AECGGLFAHGLTYQGHPVAAAVALATLSLLDEGGVLARLATCTGPYLQAQLRSRLGAH 396 A+ LF HG TY GHP+AAA A+ATL + E + R A PY + S G Sbjct: 305 APADSIELF-HGYTYSGHPLAAAAAIATLDVYREEQLFQR-AAGMAPYFEDAAHSLKGL- 361 Query: 397 VLVNEIQGTGAVAALQLA--LGKDGKQRFANENAVGLHCMRRAQHHGLIVRNSGARIILA 454 V +++ G VA ++L GK G + + + GL+ R + + L+ Sbjct: 362 PFVKDVRNLGLVAGVELEGIAGKPGARAYE-------LFTKAFWDKGLLTRVTADILALS 414 Query: 455 PALVASLAELDELIDKLT 472 P L+ + A++DE+ +T Sbjct: 415 PPLIINKAQVDEMFGSIT 432 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 147 bits (372), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 120/474 (25%), Positives = 203/474 (42%), Gaps = 39/474 (8%) Query: 21 LTNSMNHIVGRALEQRDYRAI-HLARHLLPFEDHKFLQPEHVRVIVRGQGLYVWDDHGRR 79 +T ++N I G L R R++ H + E + H G+G +++D G+R Sbjct: 1 MTGAVNKIPGSDLVARSLRSVWHPCTQMQHHETLPLIPVSH------GRGAWLYDTDGQR 54 Query: 80 LLDGMSGLWCTTLGYGRQELVAAATRQMTTLSYCSQFFNTAHPTLAELSARLFELLPAHY 139 LD +S W G+ + +A Q+ L + + H + +LS +L Sbjct: 55 YLDAISSWWVNMFGHANPRINSALRSQLDMLEH-AMLAGFTHEPVVQLSEQLAARTNHEL 113 Query: 140 SRILYCNSGSEANEILIKVVRRYWELAGRTSKRVIIGRHNGYHGSTVGSASLGGMKIMHA 199 Y + G+ A EI +K+ W G + KR + YHG T+G+ ++ + I Sbjct: 114 GHCFYASDGASAVEIALKMSFHSWRNNGLSDKREFVCLKGSYHGETIGALAVTDVPIFRD 173 Query: 200 LGASMLPEVQHIEQPFWFGYDGPLNEVEFGLHAAQALERKIIELGADNVAAFVAEPF-QG 258 +ML + P + AA ALE +++ + ++AA + EP Q Sbjct: 174 AYDAMLQHAHVVMSPDARAARDGETAADVARRAASALE-TLLQERSKHIAALIVEPLVQC 232 Query: 259 AGGMIFPPDNYWPEIQRICQRHEVLLCADEVIGGFGRTGHWFAHEYFGFQPDLLTIAKGL 318 A GM Y E++ +C +++V L ADE+ G GRTG +FA E PD L ++KG+ Sbjct: 233 ATGMAMYDPVYLQEVRALCDKYQVHLIADEIAVGCGRTGTFFACEQAAVWPDFLCLSKGI 292 Query: 319 TSGYVPMGGLVLSERVGETL--AECGGLFAHGLTYQGHPVAAAVALATLSLLDEGGVL-- 374 + GY+P+ ++ + + ++ + F H +Y G+P+A ALATL++ +E V+ Sbjct: 293 SGGYLPLSLVMTRDEIYQSFYHGDVTRGFLHSHSYTGNPLACRAALATLAIFEEDDVINA 352 Query: 375 -----ARLATCTGPYLQAQLRSRLGAHVLVNEIQGTGAVAALQLALGKDGKQRFANENAV 429 ARL P L AH V+ + G + A + N A Sbjct: 353 NRLRAARLTEALAP---------LAAHPQVSNFRQRGMIWAFDAVID--------NAEAA 395 Query: 430 GLHCMR---RAQHHGLIVRNSGARIILAPALVASLAELDELIDKLTLALDDTAR 480 R A H L++R G + L P + + E+D L + + R Sbjct: 396 STFSRRFFTTALEHELLLRPIGPTVYLMPPYILNNEEIDGLAARTQTVFEKVMR 449 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 140 bits (352), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 129/422 (30%), Positives = 199/422 (47%), Gaps = 58/422 (13%) Query: 63 VIVRGQGLYVWDDHGRRLLDGMSGLWCTTLGYGRQELVAAATRQMTTLSYCSQFFNTAHP 122 V+ +G+G+++WD+ G+R +D MS + G+ +LV A T+Q L+ S+ F T Sbjct: 28 VLSKGRGIWLWDEDGKRYMDMMSAYSAVSFGHSHPQLVQALTQQAGQLAVTSRAFYT--- 84 Query: 123 TLAELSARLFELLP--AHYSRILYCNSGSEANEILIKVVRRY-WELAGRTSKR----VII 175 + R +LL + L NSG+EA E +K R++ +++ G ++ V Sbjct: 85 ---DQLGRFLQLLCEMTGMDKALPMNSGTEAVETSLKAARKWAYKVKGVPDQQAQIIVCA 141 Query: 176 GRHNGYHGSTVGSASLGGMKIMHALGASMLPEVQHIEQPFWFG-YDGPLNEVEFGLHAAQ 234 G G + VG +S E Q+ E FG +DG + +G A Sbjct: 142 GNFAGRSTTIVGFSS----------------EAQYRE---GFGPFDGGFVTIPYG--DAA 180 Query: 235 ALERKIIELGADNVAAFVAEPFQGAGGMIFPPDNYWPEIQRICQRHEVLLCADEVIGGFG 294 ALE I + AAF+ EP QG GG+I PPD Y + + IC R +LL DEV G G Sbjct: 181 ALEAAI----TPHTAAFLVEPIQGEGGIIVPPDAYLAQCREICTRRNILLICDEVQTGLG 236 Query: 295 RTGHWFAHEYFGFQPDLLTIAKGLTSGYVPMGGLVLSERVGETLAECGGLFAHGLTYQGH 354 RTG A ++ G +PD L + K L G +P+ + V + HG T+ G+ Sbjct: 237 RTGRLLACDHEGIRPDGLILGKALGGGLLPVSAFLARSEVMDVFTPGD----HGSTFGGN 292 Query: 355 PVAAAVALATLSLLDEGGVLARLATCTGPYLQAQLRSRLGA--HVLVNEIQGTGAVAALQ 412 P+AAAV A LSLL +G ++A +LR L A H + ++G G + L+ Sbjct: 293 PLAAAVGYAALSLLRDGELIA-----AAEQRGQRLREGLNALRHPAIRSVRGKGLLIGLE 347 Query: 413 LALGKDGKQRFAN---ENAVGLHCMRRAQHHGLIVRNSGARIILAPALVASLAELDELID 469 L + F EN V + + HH +VR + II A A+ A+L ++ + + Sbjct: 348 LEPQVITARSFCERLMENGV----LSKETHH-TVVRFAPPLIITAEAIDAALRIIEHVFE 402 Query: 470 KL 471 L Sbjct: 403 TL 404 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 129 bits (325), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 121/429 (28%), Positives = 192/429 (44%), Gaps = 60/429 (13%) Query: 63 VIVRGQGLYVWDDHGRRLLDGMSGLWCTTLGYGRQELVAAATRQMTTLSYCSQ-FFNTAH 121 V G G+++ D G+R LD + G LG+ Q + A Q L S F+N Sbjct: 21 VFTEGDGMWLTDHKGKRYLDYLQGWAVNCLGHSPQCIQDALNVQAKKLINPSPAFYN--E 78 Query: 122 PTLAELSARLFELLPAH--YSRILYCNSGSEANEILIKVVRRYWEL----AGRTSKRVII 175 P++A L LL + + R+ + NSG+EANE +K+ R++ +L AG +I Sbjct: 79 PSIA-----LAALLTGNSCFDRVFFANSGAEANESAVKLARKWGKLNKNAAGENRYEIIT 133 Query: 176 GRHNGYHGSTVGSASLGGMKIMHALGASMLPEVQHIEQPFWFGYDGPLNEVEFGLHAAQA 235 H+ +HG T+ + S G + A +P + LN+++ Sbjct: 134 FDHS-FHGRTLATMSASGKAGWDTIYAPQVPGF----------FKATLNDID-------- 174 Query: 236 LERKIIELGADNVAAFVAEPFQGAGGMIFPPDNYWPEIQRICQRHEVLLCADEVIGGFGR 295 + +L D A + EP QG GG+I + ++ + + H VLL DEV G GR Sbjct: 175 ---SVKKLITDKTIAVMLEPVQGEGGVIPATREFMQALRALTKEHGVLLIVDEVQTGMGR 231 Query: 296 TGHWFAHEYFGFQPDLLTIAKGLTSGYVPMGGLVLSERVGETLAECGGLFAHGLTYQGHP 355 TG F ++ G PD++T+ KG+ G VP+ ++ E + C G TY G+P Sbjct: 232 TGELFGYQLSGITPDIMTLGKGIGGG-VPLAAMLCREEIA-----CFEPGDQGGTYNGNP 285 Query: 356 VAAAVALATLSLLDEGGVLARLATCTGPYLQAQLRSRLGAHVLVNEIQGTGAVAALQLAL 415 + AV A L G L + G YL A L H L E +G G + AL+ L Sbjct: 286 LMTAVGNAVAQALLAPGFLQSVKD-KGAYLSAALLKLTEKHGLAGE-RGDGLLRALK--L 341 Query: 416 GKDGKQRFANENAVGLHCMRRAQHH---GLIVRNSGARII-LAPALVASLAELDELIDKL 471 G D +G + +A+ GL++ + ++ PAL + ELD++I+ L Sbjct: 342 GSD----------IGPQIVEKARDLEPVGLLLNSPRPDLLRFMPALNVTYEELDQMIEML 391 Query: 472 TLALDDTAR 480 + L + R Sbjct: 392 SGVLSELKR 400 >gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate aminotransferase [Janthinobacterium sp. Marseille] Length = 431 Score = 102 bits (254), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 37/314 (11%) Query: 63 VIVRGQGLYVWDDHGRRLLDGMSGLWCTTLGYGRQELVAAATRQMTTLSYCSQFFNTAHP 122 V + Q + D+ GR +D ++G TL YG T + + Y S+ Sbjct: 21 VFAKAQNAVLTDEGGRSYIDFLAG--AGTLNYGHNN----PTMKQAVIDYLSEDGIVHGL 74 Query: 123 TLAELSARLF-------ELLP--AHYSRILYCNSGSEANEILIKVVRRYWELAGRTSKRV 173 +A + + F LLP Y +G+ A E IK+ R T +++ Sbjct: 75 DMATSAKKTFLQTFESHVLLPRKMQYKIQFTGPTGTNAVEAAIKLARNV------TGRQM 128 Query: 174 IIGRHNGYHGSTVGSASLGGMKIMHALGASMLPEVQHIEQPFWFGYDGPLNEVEFGLHAA 233 +I NG+HG ++GS +L G + L +V +FG + + Sbjct: 129 VISFTNGFHGVSLGSLALTGNRKFRDAAGVSLNDVHRAPYSGYFGMN---------IDTI 179 Query: 234 QALERKIIE--LGADNVAAFVAEPFQGAGGMIFPPDNYWPEIQRICQRHEVLLCADEVIG 291 L++ I++ G D AA + E QG GG+ N+ +++++CQRHE+LL D++ Sbjct: 180 AMLDKLIVDPSSGVDLPAAIIVECVQGEGGLNVAGLNWLKKLEQLCQRHEILLIVDDIQA 239 Query: 292 GFGRTGHWFAHEYFGFQPDLLTIAKGLTSGYVPMGGLVLSERVGETLAECGGLFAHGLTY 351 G GRTG +F+ E G +PD++T++K L+ +PM L++ ++ + H T+ Sbjct: 240 GCGRTGTFFSFEPAGIKPDIITLSKSLSGFGLPMAVLLMKPQL-----DVWKPGQHNGTF 294 Query: 352 QGHPVAAAVALATL 365 +G+ +A A A L Sbjct: 295 RGNNLAFVTATAAL 308 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.323 0.139 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,145,811 Number of extensions: 50036 Number of successful extensions: 126 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 113 Number of HSP's successfully gapped: 6 Length of query: 485 Length of database: 1,221,021 Length adjustment: 87 Effective length of query: 398 Effective length of database: 899,382 Effective search space: 357954036 Effective search space used: 357954036 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 131 (55.1 bits)