BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2445.p
         (242 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981275|ref|YP_001354152.1| short-chain alcohol dehydrogena...    60   1e-10
gi|152981443|ref|YP_001353048.1| 3-oxoacyl-[acyl-carrier protein...    58   5e-10
gi|152980907|ref|YP_001351806.1| short chain dehydrogenase [Jant...    58   6e-10

>gi|152981275|ref|YP_001354152.1| short-chain alcohol dehydrogenase
           [Janthinobacterium sp. Marseille]
          Length = 248

 Score = 60.5 bits (145), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 13/187 (6%)

Query: 1   MKAIVTGHTRGLGAAIAAELMQREVAVLGLARRRN--ETLAQQWPALLHQQVIDLADPGQ 58
           M  +VTG T G GA +A +  Q    V+   RR++  + LA +    +    +D+ D   
Sbjct: 1   MIVLVTGATSGFGAEMARKFAQHGHKVIATGRRQDRLDALAAEIGPSVLTVAMDVTDKES 60

Query: 59  LLSWLDGDALSAFLADEAEV-LLINNAATIQPSGALPHQCAQDIAQAVMLNVGAALILSA 117
           + +     AL+    +  E+ +LINNA      G  P Q A       M+      +++ 
Sbjct: 61  IAA-----ALAGLPPEWKEIDVLINNAGLAL--GVAPAQSASLEQWETMIETNCKGLVTV 113

Query: 118 RLATLAQARLGCECRILHLSSGAGRQAYPGWSVYGASKAALDHHARAVAQD--GTPGLRI 175
               L +        I+++SS AG  AYPG +VYGA+KA +D   R +  D  GT G+R 
Sbjct: 114 TRLLLPEMLKRNRGTIINISSSAGAYAYPGANVYGATKAFVDQFTRNLRADLVGT-GVRA 172

Query: 176 CSVAPGV 182
            ++APG+
Sbjct: 173 SNIAPGL 179


>gi|152981443|ref|YP_001353048.1| 3-oxoacyl-[acyl-carrier protein]
           reductase [Janthinobacterium sp. Marseille]
          Length = 247

 Score = 58.2 bits (139), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 23/206 (11%)

Query: 3   AIVTGHTRGLGAAIAAELMQREVAVLGLARRR------NETLAQQWPALLHQQVIDLADP 56
           A+VTG +RG+G AIA EL +    V+G A         +E L      +    V+D+ D 
Sbjct: 11  ALVTGASRGIGRAIAQELAKLGAKVIGTATSESGAAAISEYLGNGGKGV----VLDVNDA 66

Query: 57  GQLLSWLDGDALSAFLADEAEVLLINNAATIQPSGALPHQCAQDIAQAVMLNVGAALILS 116
            + ++ +D +    F    A  +L+NNA   Q   A+  +  ++    +  N+ A   LS
Sbjct: 67  ARSVALID-EIQKEF---GAVSILVNNAGITQDQLAMRMKD-EEWDSVIATNLTAVGRLS 121

Query: 117 -ARLATLAQARLGCECRILHLSSGAGRQAYPGWSVYGASKAALDHHARAVAQD-GTPGLR 174
            A L  + +A+ G   RI++++S  G     G   Y A+KA +   +RA+A++ G+  + 
Sbjct: 122 RAVLRGMMKAKTG---RIINITSVVGSSGNAGQMNYAAAKAGVAGMSRALAREIGSRNIT 178

Query: 175 ICSVAPGVIDTDMQAELRDLPEERFA 200
           +  +APG IDTDM    + L E++ A
Sbjct: 179 VNCIAPGFIDTDMT---KTLSEQQIA 201


>gi|152980907|ref|YP_001351806.1| short chain dehydrogenase
           [Janthinobacterium sp. Marseille]
          Length = 263

 Score = 57.8 bits (138), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 23/215 (10%)

Query: 2   KAIVTGHTRGLGAAIAAELMQREVAVLGLARRRNETLAQQWPAL----LHQ-QVIDLADP 56
           +  +TG + GLGAA+A +  Q+  AVLGL  RRNE L +   AL     HQ   +D+ D 
Sbjct: 7   RVFITGASSGLGAALARQYAQQG-AVLGLVARRNEVLQELKAALPNAAEHQVYALDVNDH 65

Query: 57  GQLLSWLDGDALSAFLADEAEV-LLINNAATIQPSGALPHQCAQDIAQAVMLNVGAAL-I 114
             L       A + F+     + ++I NA   + +     +  Q   Q    NV A +  
Sbjct: 66  AALAQ-----AAADFINHAQGIDIVIANAGISRGTLTEYAEDLQVFEQVFATNVTATVAT 120

Query: 115 LSARLATL-AQARLG-CECRILHLSSGAGRQAYPGWSVYGASKAALDHHARAVAQD-GTP 171
            S  +AT+  QA  G   CR++ + S AG +  PG   Y ASK+A+  +  ++  +    
Sbjct: 121 FSPFIATMQTQAAAGHTNCRLVGIGSVAGIRGLPGAGAYSASKSAVISYCESLRVELKKS 180

Query: 172 GLRICSVAPGVIDTDMQAELRD------LPEERFA 200
           G+++ ++APG IDT M  ++ D      +P  +FA
Sbjct: 181 GIKVVTIAPGYIDTPM-TQVNDYAMPFLMPVGKFA 214


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 574,996
Number of extensions: 22972
Number of successful extensions: 118
Number of sequences better than 1.0e-08: 4
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 4
Length of query: 242
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 161
Effective length of database: 921,564
Effective search space: 148371804
Effective search space used: 148371804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 128 (53.9 bits)