BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2350.p
         (382 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982957|ref|YP_001353966.1| spore coat biosynthesis protein...   134   7e-33
gi|152983114|ref|YP_001353970.1| DegT/DnrJ/EryC1/StrS aminotrans...    91   2e-19

>gi|152982957|ref|YP_001353966.1| spore coat biosynthesis protein
           [Janthinobacterium sp. Marseille]
          Length = 363

 Score =  134 bits (338), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 135/261 (51%), Gaps = 2/261 (0%)

Query: 6   IKLSDPDVSTRELEAVTRVLVSSGL-SAGPVVESFENEFASYLGRTYGVTAASGTVALML 64
           I+L  P +   E+EA  R +  +G+ + G  VE+   E   Y G  +   A S T AL  
Sbjct: 4   IRLIKPYLQFAEVEAEFREIFENGMFTRGQHVEALRQELKEYTGAKHAFLATSATTALWT 63

Query: 65  ALRAMGIRAGDEVIASAYSWHQIVHAITLVGATPVFADIDYWSGNLAPHKVADKISQRTR 124
            ++ + I+ GDEVI S +SW    + +  +GA PVFAD+   + N+ P  +  KI+ RT+
Sbjct: 64  CMKLLDIKQGDEVIVSDFSWPATANVVEDMGARPVFADVSLETFNMLPEDLESKINARTK 123

Query: 125 AIVVGNCNGHPAAWAEFRQLAQAHGLRLIEDSTEAIGSRYQGRVVGNFGDIAIFDFSQPS 184
           A++  +  G+P+  +E +++ + HG+ LIED+  AIGS   GR  G+  DI  F F    
Sbjct: 124 AVIFVDALGNPSGLSEIKKICERHGVPLIEDAACAIGSSEFGRRCGSIADITCFSFHPRK 183

Query: 185 ALCCGEGAMLVTDDPELASELHYMRNRNLADRQSIAVA-SRVPMQASMSDLSAAIGIAQL 243
            +  GEG  ++TD  + A  L       ++  +   V          + +++A +G  QL
Sbjct: 184 LINTGEGGAILTDRDDWAQWLEIKLGAGVSGMKGPGVDFVDFGYNFRLPEMAALMGRRQL 243

Query: 244 ERLDEILMRRKQVEAYYLEHV 264
            +L+ I+  R ++ + Y+E +
Sbjct: 244 AKLESIVDERNEIRSLYVEKL 264


>gi|152983114|ref|YP_001353970.1| DegT/DnrJ/EryC1/StrS
           aminotransferase family protein [Janthinobacterium sp.
           Marseille]
          Length = 373

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 32/350 (9%)

Query: 36  VESFENEFASYLGRTYGVTAASGTVALMLALRAMGIRAGDEVIASAYSWHQIVHAITLVG 95
           VE+ E      LG +Y V  A+GT AL LALRA+G+ AGD V+    ++     A+  VG
Sbjct: 38  VETLEKRLVETLGVSYAVGCANGTDALQLALRALGVGAGDTVLVPNATFWATFEAVVNVG 97

Query: 96  ATPVFADIDYWSGNLAPHKVADKISQ-RTRAIVVGNCNGHPAA-WAEFRQLAQAHGLRLI 153
           A+P   D++   G +  +     + + + +A ++ +  G  +A   E R L   H + L+
Sbjct: 98  ASPATVDVNIADGGVDLNAFEQALVEAKPKAAMIVHLYGWGSARLNELRSLCLKHSVPLL 157

Query: 154 EDSTEAIGSRYQGRVVGNFGDIAIFDFSQPSAL-CCGEGAMLVTDDPELASELHYMRNRN 212
           ED  +  G +YQ   +     I+   F     L   G+G  + T+DP LA ++  + N  
Sbjct: 158 EDGAQCFGVKYQDESIFKGAHISTTSFYPAKVLGAAGDGGAVFTNDPVLADKVRRLGNHG 217

Query: 213 LADRQSIAVASRVPMQASMSDLSAAIGIAQLERLDEILMRRKQVEAYYLEHVQFFEGIKP 272
              R +      V   + +  L AA     L+ +D  +  R++  ++Y E +    G+ P
Sbjct: 218 ---RTAHYGYGDVGWNSRLDALQAAFLNISLDYIDARIESRQKSASFYREQLPAV-GLAP 273

Query: 273 PYIGPD--VEEVYWMLYLV---HLGTRFTRTMRNQ------IIEDLASQEVEAAAWCQPL 321
             + P+   E  Y  + LV   +  ++  + ++ +      I   + S +V AA + +  
Sbjct: 274 MSV-PEGYTENGYCNVCLVPDKNEKSKLEKLLKERSIGFGNIYPGVMSAQVGAAPYLK-- 330

Query: 322 HQQFYYSRFGCKRGDLLLTEKIADRCIALPLHGHLNTDEVHFIVQAAKDA 371
                 +++G  + ++L      +  + LPL  ++ ++E+ +++ A +D+
Sbjct: 331 ------AQYGGSQANVL-----CESVLNLPLFPYMTSEELEYVISAVRDS 369


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 885,749
Number of extensions: 35964
Number of successful extensions: 120
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 2
Length of query: 382
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 297
Effective length of database: 906,776
Effective search space: 269312472
Effective search space used: 269312472
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)