BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2345.p
         (134 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981751|ref|YP_001353033.1| globin-like protein [Janthinoba...   126   4e-31

>gi|152981751|ref|YP_001353033.1| globin-like protein
           [Janthinobacterium sp. Marseille]
          Length = 137

 Score =  126 bits (317), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 81/119 (68%)

Query: 15  YQQIGGEPIVRQLVDRFYALMEQLPQAAVVRAMHPADLAPAKQRLFMFLSGWLGGPPLYA 74
           Y+ IGG+  VR+LVDRFY LM+  P  A +RAMHP  L  ++ +L+ FLSGW GGP ++ 
Sbjct: 16  YELIGGDAKVRELVDRFYDLMDLEPAFAGIRAMHPTTLEGSRDKLYWFLSGWTGGPNMFV 75

Query: 75  EAFGHPRLRHAHAGFAIDAAARDAWMACMNQALQELVPDEVLRQQLGAAFFKTADFLCN 133
           E FGHPRLR  H  +AI    RD W+ CM  A+Q++  +E ++++L  AF+ TAD++ N
Sbjct: 76  ERFGHPRLRARHLPYAIATDERDQWLRCMETAMQDVGIEEQIQKRLQQAFYDTADWMRN 134


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.325    0.137    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 289,378
Number of extensions: 9256
Number of successful extensions: 35
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 1,221,021
Length adjustment: 74
Effective length of query: 60
Effective length of database: 947,443
Effective search space: 56846580
Effective search space used: 56846580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 124 (52.4 bits)