BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2242.p
         (127 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate...    97   2e-22

>gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate
           aminotransferase [Janthinobacterium sp. Marseille]
          Length = 431

 Score = 97.4 bits (241), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 4/113 (3%)

Query: 15  GRVFIDCLAGAGTLALGHNHPAVIEAIVPLLHEGAALHTLDLTTPVKDRFMQDLLE--IL 72
           GR +ID LAGAGTL  GHN+P + +A++  L E   +H LD+ T  K  F+Q      +L
Sbjct: 35  GRSYIDFLAGAGTLNYGHNNPTMKQAVIDYLSEDGIVHGLDMATSAKKTFLQTFESHVLL 94

Query: 73  PPEFARQARIQFCGPTGADAIEAALKLVKSATGGGTVLAFQGAYHGMTQGGAA 125
           P +   Q +IQF GPTG +A+EAA+KL ++ TG   V++F   +HG++ G  A
Sbjct: 95  PRKM--QYKIQFTGPTGTNAVEAAIKLARNVTGRQMVISFTNGFHGVSLGSLA 145


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.140    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 324,935
Number of extensions: 12926
Number of successful extensions: 49
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 1,221,021
Length adjustment: 73
Effective length of query: 54
Effective length of database: 951,140
Effective search space: 51361560
Effective search space used: 51361560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 124 (52.4 bits)