BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2230.p (490 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate... 261 7e-71 gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Jan... 155 7e-39 gi|152980209|ref|YP_001352373.1| acetylornithine transaminase pr... 144 8e-36 gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-o... 125 5e-30 gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transami... 106 3e-24 >gi|152982546|ref|YP_001355290.1| diaminobutyrate--2-oxoglutarate aminotransferase [Janthinobacterium sp. Marseille] Length = 431 Score = 261 bits (667), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 159/431 (36%), Positives = 232/431 (53%), Gaps = 30/431 (6%) Query: 40 RQESNARSYPRRLPLVLKRGAGIYVEDIEGRVFIDCLAGAGTLALGHNHPAVIEAIVALL 99 R ES R Y R P V + + D GR +ID LAGAGTL GHN+P + +A++ L Sbjct: 6 RLESEVRGYIRSFPTVFAKAQNAVLTDEGGRSYIDFLAGAGTLNYGHNNPTMKQAVIDYL 65 Query: 100 HDGAALHTLDLTTPVKDRFMQDLLE--ILPPELSRQARVQFCGPTGADAIEAALKLVKSA 157 + +H LD+ T K F+Q +LP ++ Q ++QF GPTG +A+EAA+KL ++ Sbjct: 66 SEDGIVHGLDMATSAKKTFLQTFESHVLLPRKM--QYKIQFTGPTGTNAVEAAIKLARNV 123 Query: 158 TGGGTVLAFQGAYHGMTQGALQLMGSLAPKAPLNGILSGVQFLPYPYDYRCPLGLGGDAG 217 TG V++F +HG++ G+L L G+ + L+ V PY + G+ D Sbjct: 124 TGRQMVISFTNGFHGVSLGSLALTGNRKFRDAAGVSLNDVHRAPYSGYF----GMNIDT- 178 Query: 218 VRAGLHYIAATLNDPEGGVPKPAGVVVEAIQGEGGVIAAPPAWLAGLRQLTQSAEVPLIL 277 + + + DP GV PA ++VE +QGEGG+ A WL L QL Q E+ LI+ Sbjct: 179 ----IAMLDKLIVDPSSGVDLPAAIIVECVQGEGGLNVAGLNWLKKLEQLCQRHEILLIV 234 Query: 278 DEVQSGFGRSGKMFAFEHAGITPDVVVLSKAIGG-GLPLSVVVYKEQLDQWKPGAHAGTF 336 D++Q+G GR+G F+FE AGI PD++ LSK++ G GLP++V++ K QLD WKPG H GTF Sbjct: 235 DDIQAGCGRTGTFFSFEPAGIKPDIITLSKSLSGFGLPMAVLLMKPQLDVWKPGQHNGTF 294 Query: 337 RGNQLAMAAGSATMRVLRSEDLAGQA-RTKGQRLETALLALRQLHPHIGEV-RGRGLMLG 394 RGN LA +A ++ ++ A + K +E L L +P RGRG+M G Sbjct: 295 RGNNLAFVTATAALQHYWGDNRFQMAIQKKSLVIEAFLDKLVASYPDAQLTRRGRGMMQG 354 Query: 395 VEIIDPQAPADVLGNPAAAPALARALQHECLRRGLILELGGRHGCVVRFLPPLVIGEDEL 454 + D PALA + + GLI+E G VV+ L PL I ++ L Sbjct: 355 IACAD--------------PALADRITSIAFQNGLIIETSGGEDEVVKLLMPLTIEQETL 400 Query: 455 ERVIDIFAQAL 465 +DI A+ Sbjct: 401 LAGLDILEHAV 411 >gi|152980626|ref|YP_001351837.1| ornithine aminotransferase [Janthinobacterium sp. Marseille] Length = 413 Score = 155 bits (391), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 123/426 (28%), Positives = 199/426 (46%), Gaps = 57/426 (13%) Query: 52 LPLVLKRGAGIYVEDIEGRVFIDCLAGAGTLALGHNHPAVIEAIVALLHDGAALHTLDLT 111 LP+VL +G GI++ D +G+ ++D ++ ++ GH+HP +++A+ A+ + Sbjct: 25 LPVVLSKGRGIWLWDEDGKRYMDMMSAYSAVSFGHSHPQLVQALTQQAGQ-LAVTSRAFY 83 Query: 112 TPVKDRFMQDLLEILPPELSRQARVQFCGPTGADAIEAALKLVKSATGG--------GTV 163 T RF+Q L E+ + + +G +A+E +LK + + Sbjct: 84 TDQLGRFLQLLCEMTGMDKALPMN------SGTEAVETSLKAARKWAYKVKGVPDQQAQI 137 Query: 164 LAFQGAYHGMTQGALQLMGSLAPKAPLNGILSGVQFLPYPYDYRCPLGLGGDAGVRAGLH 223 + G + G + + + G +PY G A + A + Sbjct: 138 IVCAGNFAGRSTTIVGFSSEAQYREGFGPFDGGFVTIPY----------GDAAALEAAI- 186 Query: 224 YIAATLNDPEGGVPKPAGVVVEAIQGEGGVIAAPPAWLAGLRQLTQSAEVPLILDEVQSG 283 P A +VE IQGEGG+I P A+LA R++ + LI DEVQ+G Sbjct: 187 ------------TPHTAAFLVEPIQGEGGIIVPPDAYLAQCREICTRRNILLICDEVQTG 234 Query: 284 FGRSGKMFAFEHAGITPD-VVVLSKAIGGGLPLSVVVYK-EQLDQWKPGAHAGTFRGNQL 341 GR+G++ A +H GI PD +++ GG LP+S + + E +D + PG H TF GN L Sbjct: 235 LGRTGRLLACDHEGIRPDGLILGKALGGGLLPVSAFLARSEVMDVFTPGDHGSTFGGNPL 294 Query: 342 AMAAGSATMRVLRSEDLAGQARTKGQRLETALLALRQLHPHIGEVRGRGLMLGVEIIDPQ 401 A A G A + +LR +L A +GQRL L ALR HP I VRG+GL++G+E ++PQ Sbjct: 295 AAAVGYAALSLLRDGELIAAAEQRGQRLREGLNALR--HPAIRSVRGKGLLIGLE-LEPQ 351 Query: 402 APADVLGNPAAAPALARALQHECLRRGLILELGGRHGCVVRFLPPLVIGEDELERVIDIF 461 AR+ + G++ + H VVRF PPL+I + ++ + I Sbjct: 352 V------------ITARSFCERLMENGVLSK--ETHHTVVRFAPPLIITAEAIDAALRII 397 Query: 462 AQALRV 467 Sbjct: 398 EHVFET 403 >gi|152980209|ref|YP_001352373.1| acetylornithine transaminase protein [Janthinobacterium sp. Marseille] Length = 400 Score = 144 bits (364), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 129/431 (29%), Positives = 207/431 (48%), Gaps = 66/431 (15%) Query: 50 RRLPLVLKRGAGIYVEDIEGRVFIDCLAGAGTLALGHNHPAVIEAIVALLHDGAALHTLD 109 R LV G G+++ D +G+ ++D L G LGH+ P I+ D + Sbjct: 16 NRPELVFTEGDGMWLTDHKGKRYLDYLQGWAVNCLGHS-PQCIQ-------DALNVQAKK 67 Query: 110 LTTPVKDRFMQDLLEI--LPPELSRQARVQFCGPTGADAIEAALKLV-------KSATGG 160 L P + + + + L S RV F +GA+A E+A+KL K+A G Sbjct: 68 LINPSPAFYNEPSIALAALLTGNSCFDRVFFAN-SGAEANESAVKLARKWGKLNKNAAGE 126 Query: 161 G--TVLAFQGAYHGMTQGALQLMGSLAPKAPLNGILSGVQFLPYPYDYRCPLGLGGDAGV 218 ++ F ++HG T + G KA + I Y + P Sbjct: 127 NRYEIITFDHSFHGRTLATMSASG----KAGWDTI----------YAPQVP--------- 163 Query: 219 RAGLHYIAATLNDPEGG----VPKPAGVVVEAIQGEGGVIAAPPAWLAGLRQLTQSAEVP 274 + ATLND + K V++E +QGEGGVI A ++ LR LT+ V Sbjct: 164 ----GFFKATLNDIDSVKKLITDKTIAVMLEPVQGEGGVIPATREFMQALRALTKEHGVL 219 Query: 275 LILDEVQSGFGRSGKMFAFEHAGITPDVVVLSKAIGGGLPLSVVVYKEQLDQWKPGAHAG 334 LI+DEVQ+G GR+G++F ++ +GITPD++ L K IGGG+PL+ ++ +E++ ++PG G Sbjct: 220 LIVDEVQTGMGRTGELFGYQLSGITPDIMTLGKGIGGGVPLAAMLCREEIACFEPGDQGG 279 Query: 335 TFRGNQLAMAAGSATMRVLRSEDLAGQARTKGQRLETALLALRQLHPHIGEVRGRGLMLG 394 T+ GN L A G+A + L + + KG L ALL L + H GE RG GL+ Sbjct: 280 TYNGNPLMTAVGNAVAQALLAPGFLQSVKDKGAYLSAALLKLTEKHGLAGE-RGDGLLRA 338 Query: 395 VEIIDPQAPADVLGNPAAAPALARALQHECLRRGLILELGGRHGCVVRFLPPLVIGEDEL 454 ++ LG+ + +A E + GL+L ++RF+P L + +EL Sbjct: 339 LK----------LGSDIGPQIVEKARDLEPV--GLLLN--SPRPDLLRFMPALNVTYEEL 384 Query: 455 ERVIDIFAQAL 465 +++I++ + L Sbjct: 385 DQMIEMLSGVL 395 >gi|152980665|ref|YP_001351810.1| adenosylmethionine--8-amino-7-oxononanoate transaminase [Janthinobacterium sp. Marseille] Length = 450 Score = 125 bits (314), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 125/463 (26%), Positives = 200/463 (43%), Gaps = 62/463 (13%) Query: 32 HPLLQRQARQESNARSYPRRLPLV-LKRGAGIYVEDIEGRVFIDCLAGAGTLALGHNHPA 90 HP Q Q + LPL+ + G G ++ D +G+ ++D ++ GH +P Sbjct: 23 HPCTQMQHHET---------LPLIPVSHGRGAWLYDTDGQRYLDAISSWWVNMFGHANPR 73 Query: 91 VIEAIVALLHDGAALHTLDLTTPVKDRFMQDLLEILPPELSRQARVQFCGPTGADAIEAA 150 + A+ + L L L + +Q L E L + + F GA A+E A Sbjct: 74 INSALRSQLD---MLEHAMLAGFTHEPVVQ-LSEQLAARTNHELGHCFYASDGASAVEIA 129 Query: 151 LKL-VKSATGGG-----TVLAFQGAYHGMTQGALQLMGSLAPKAPLNGILSGVQFLPYPY 204 LK+ S G + +G+YHG T GAL + + + +L + P Sbjct: 130 LKMSFHSWRNNGLSDKREFVCLKGSYHGETIGALAVTDVPIFRDAYDAMLQHAHVVMSP- 188 Query: 205 DYRCPLG--LGGDAGVRAGLHYIAATLNDPEGGVPKPAGVVVE-AIQGEGGVIAAPPAWL 261 D R D RA + L + + A ++VE +Q G+ P +L Sbjct: 189 DARAARDGETAADVARRAA-SALETLLQERSKHI---AALIVEPLVQCATGMAMYDPVYL 244 Query: 262 AGLRQLTQSAEVPLILDEVQSGFGRSGKMFAFEHAGITPDVVVLSKAIGGG-LPLSVVVY 320 +R L +V LI DE+ G GR+G FA E A + PD + LSK I GG LPLS+V+ Sbjct: 245 QEVRALCDKYQVHLIADEIAVGCGRTGTFFACEQAAVWPDFLCLSKGISGGYLPLSLVMT 304 Query: 321 KEQL-------DQWKPGAHAGTFRGNQLAMAAGSATMRVLRSEDLAGQARTKGQRLETAL 373 ++++ D + H+ ++ GN LA A AT+ + +D+ R + RL AL Sbjct: 305 RDEIYQSFYHGDVTRGFLHSHSYTGNPLACRAALATLAIFEEDDVINANRLRAARLTEAL 364 Query: 374 LALRQLHPHIGEVRGRGLMLGVEIIDPQAPADVLGNPAAAPALAR-----ALQHECLRRG 428 L HP + R RG++ + V+ N AA +R AL+HE L R Sbjct: 365 APL-AAHPQVSNFRQRGMIWAFDA--------VIDNAEAASTFSRRFFTTALEHELLLRP 415 Query: 429 LILELGGRHGCVVRFLPPLVIGEDELE----RVIDIFAQALRV 467 + G V +PP ++ +E++ R +F + +RV Sbjct: 416 I--------GPTVYLMPPYILNNEEIDGLAARTQTVFEKVMRV 450 >gi|152979966|ref|YP_001354181.1| beta alanine--pyruvate transaminase [Janthinobacterium sp. Marseille] Length = 439 Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 126/437 (28%), Positives = 193/437 (44%), Gaps = 47/437 (10%) Query: 53 PLVLKRGAGIYVEDIEGRVFIDCLAGAGTLALGHNHPAVIEAIV--ALLHDGAALHTLDL 110 P +L +G+Y +GR +D AG + GH HP + EAI A D A L + Sbjct: 24 PRMLVAASGMYYTSDDGRQILDGTAGLWCVNAGHGHPKITEAIQKQAASMDYAPL--FQI 81 Query: 111 TTPVKDRFMQDLLEILPPELSRQARVQFCGPTGADAIEAALKL------VKSATGGGTVL 164 P+ L EI P L+R V FC G++ ++ ALK+ ++ G ++ Sbjct: 82 GHPLAFEAATALAEIAPAGLNR---VFFCN-DGSEGVDTALKIALAYHRIRGDAGRTRLI 137 Query: 165 AFQGAYHGMTQGALQLMGSLAPKAPLNGILSGVQFLPYPYD-----YRCPLGLGGDAGVR 219 + AYHG+ G + + G + L+ L +P D Y L L G A + Sbjct: 138 GRERAYHGVGFGGIAVGGIAGNRKQFGPGLAA-DHLRHPLDIAKNAYSRGLPLHG-AEMA 195 Query: 220 AGLHYIAATLNDPEGGVPKPAGVVVEAIQGEGGVIAAPPAWLAGLRQLTQSAEVPLILDE 279 L L+DP A V+VE +QG GVI P +L LR + V LI DE Sbjct: 196 DELEQRLLALHDPS----TVAAVIVEPLQGSTGVILPPKGYLEKLRVICDKHGVLLIFDE 251 Query: 280 VQSGFGRSGKMFAFEHAGITPDVVVLSKAI-GGGLPLSVVVYKEQLD----QWKPG---- 330 V +GFGR G F + G+ PD++V +KA+ +P+ V+ E++ Q P Sbjct: 252 VITGFGRLGTAFGADFFGVKPDMIVCAKALTNAAVPMGAVIVHEKIHETFMQMAPADSIE 311 Query: 331 -AHAGTFRGNQLAMAAGSATMRVLRSEDLAGQARTKGQRLETALLALRQLHPHIGEVRGR 389 H T+ G+ LA AA AT+ V R E L +A E A +L+ L P + +VR Sbjct: 312 LFHGYTYSGHPLAAAAAIATLDVYREEQLFQRAAGMAPYFEDAAHSLKGL-PFVKDVRNL 370 Query: 390 GLMLGVEIIDPQAPADVLGNPAAAPALARALQHECLRRGLILELGGRHGCVVRFLPPLVI 449 GL+ GVE+ + G P A +GL+ + ++ PPL+I Sbjct: 371 GLVAGVEL------EGIAGKPGARA--YELFTKAFWDKGLLTRVTAD---ILALSPPLII 419 Query: 450 GEDELERVIDIFAQALR 466 + +++ + L+ Sbjct: 420 NKAQVDEMFGSITDILK 436 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.139 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,143,992 Number of extensions: 51602 Number of successful extensions: 180 Number of sequences better than 1.0e-08: 6 Number of HSP's gapped: 161 Number of HSP's successfully gapped: 6 Length of query: 490 Length of database: 1,221,021 Length adjustment: 87 Effective length of query: 403 Effective length of database: 899,382 Effective search space: 362450946 Effective search space used: 362450946 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)