BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2202.p (683 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982620|ref|YP_001352905.1| TonB-dependent siderophore rece... 89 9e-19 gi|152982236|ref|YP_001353715.1| ferric siderophore receptor [Ja... 72 1e-13 gi|152982643|ref|YP_001351756.1| TonB-dependent receptor [Janthi... 72 2e-13 gi|152981136|ref|YP_001355272.1| outer membrane receptor for fer... 64 4e-11 gi|152981258|ref|YP_001355221.1| outer membrane receptor [Janthi... 63 6e-11 >gi|152982620|ref|YP_001352905.1| TonB-dependent siderophore receptor [Janthinobacterium sp. Marseille] Length = 804 Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 149/597 (24%), Positives = 244/597 (40%), Gaps = 88/597 (14%) Query: 130 VEQVELLRGPQGSLFGRNAAAGVINIVTRQPDNELAGHVEGGFGNRGRRTTTASISGPLV 189 +E+VE+LRGP +G+ A G++N V+++P+ + +E +G+ R+ + + Sbjct: 253 LERVEILRGPASVAYGQGDAGGIVNRVSKRPNGKSIREIEMQYGSFDRKQLAFDLGDRVN 312 Query: 190 KDSLYGEAVIAYDSADGFLRSLSSGQDNVGMHEDVAGQVKLRYAPVGGPLDVRFMASHEC 249 + Y A DS + + S+G +A LR+ P E Sbjct: 313 DEVSYRLVGSALDSNNE--QKYSNGYKMANQRYYLAP--SLRWQPSAA---TSLTLLSEF 365 Query: 250 VRSAEDNYVSYTNFSNRVILDGNSVPGLATMNSYMKRCIDNMSLSADYDFSD---YRLSL 306 +++ D+ + Y N +N + SV G S + + ++ + FSD +R + Sbjct: 366 MKNKADDNLGYVNAANGSL---TSVKGGDPGYSKINQDQASVGYQFQHHFSDTWEFRQNF 422 Query: 307 VTARNKVD---IRERLLGAQGKSMPESQESLSQEVR---LATRGTGRAWDG------VVG 354 + VD +R +L A ++ P + ++ EV L T+ G+ G ++G Sbjct: 423 RYSNTSVDKHILRLGVLQADNRTYPRTARAIDGEVNQTALDTQLLGKLKAGTTEHTVLLG 482 Query: 355 AYFEHGRYKQRSSY-------VLFP----------TFGTDSSQTTTDSAAVFVDGTWHVT 397 + R +RS +L P TF + SQTT V+V + Sbjct: 483 VDWNQIRGDERSYIGAAPSLDILNPVYNLPIAEPQTFLGNYSQTTR-RIGVYVQDQIKLN 541 Query: 398 PRWDVSAGARLVQDKAETSGVLPIEGVAAYASSTSSNKALGKLSTGYQLTPSLRSYASLS 457 W V+ G R K T+ L + S+ S + G+ Y + Y S + Sbjct: 542 QHWIVTVGGRQDDVKVTTNDRL-----NSKQSAQSDSVFSGRAGLTYLVGNGWAPYISYA 596 Query: 458 QGYKP-GGYNLQPTSANDSRSYRPETSLNYEMGLKFNTPDQKVSARAAVFQIESRNTQLY 516 + + P GG +L D ++P E G+KF + + AAVF I N Y Sbjct: 597 ESFLPTGGLDL------DGNPFKPSKGKQVEAGIKFQPENSRTLYTAAVFDIRKTNVVTY 650 Query: 517 QGIVGSQYLTNAGQARSRGIEANLSAEVLRNWTLGLDAQVVDSIFTDYHVNSSTDYTG-N 575 I G+ RSRG+E E++R GL+A ++ D V S D T + Sbjct: 651 DNITFDA--RQIGKQRSRGLELEAKTELMR----GLNATASYTVL-DMKVVESADRTEVD 703 Query: 576 KLPF-VPRYILAASLSGRIATDVGMVRPRVAARYIGQQQFDAANSLKQQGYMLVDGQVS- 633 K P VP+ + L + +G RYIG++ DA N+ K+ G LVD + Sbjct: 704 KTPIQVPKQTASVWLDYMMGNGLGFG---GGVRYIGERWNDAINTSKEPGVTLVDAAIHL 760 Query: 634 ----WRATSKLDVSFYIN--NAFDKRYLNYAATS-NGLRFGTLGEGREFGVKLRYDF 683 WR F +N N FDK+Y YA+ + NG LG+ R + RY F Sbjct: 761 DQGPWR--------FALNAANLFDKKY--YASRAFNGY---YLGQERNINLTARYRF 804 >gi|152982236|ref|YP_001353715.1| ferric siderophore receptor [Janthinobacterium sp. Marseille] Length = 802 Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 16/218 (7%) Query: 440 LSTGYQLTPSLRSYASLSQGYKPGGYNLQPTSANDSRSYRPETSLNYEMGLKFNTPDQKV 499 L+ Y+L P+ +YAS + +PG ++ AN P S YE+GLK N D Sbjct: 573 LALMYKLAPNTMAYASYMESLEPGS-SVGVAYANYRSMLDPLKSKQYEIGLKTNQTDW-- 629 Query: 500 SARAAVFQIESRNTQLYQGIVGSQYLTNAGQARSRGIEANLSAEVLRNWTLGLDAQVVDS 559 SA AA+F+IE ++ V L G A +GIE +A + RNW LG +DS Sbjct: 630 SATAAMFRIEKKSEYGNSANV----LVQDGTAIYQGIELGAAARLARNWNLGGSVMWLDS 685 Query: 560 IFTDYHVNSSTDYTGNKLPFVPRYILAASLSGRIATDVGMVRPRVAARYIGQQQFDAANS 619 + + Y G ++ P ++AA L+ + +V ++ +Y G +N+ Sbjct: 686 EYQNGFA-----YAGQRVAGAPDAVVAAQLAYTVP-EVPGLKLNANMKYTGATMLRPSNN 739 Query: 620 LKQQGYMLVD-GQVSWRATSKLDVSF--YINNAFDKRY 654 L+ Y L++ G V + D +F INNA DKRY Sbjct: 740 LQAPAYTLLNIGAVYETRINGYDTTFRVAINNATDKRY 777 >gi|152982643|ref|YP_001351756.1| TonB-dependent receptor [Janthinobacterium sp. Marseille] Length = 717 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 120/303 (39%), Gaps = 15/303 (4%) Query: 384 DSAAVFVDGTWHVTPRWDVSAGARLVQDKAETSGVLPIEGVAAYASSTSSNKALGKLSTG 443 D +VF + + +W V G R D A+ S + G A+ S+ +L T Sbjct: 427 DQYSVFAENRLELNDKWSVLGGLRY--DHADVSRTDLVSGTPAFDQKYSN--VGWRLGTV 482 Query: 444 YQLTPSLRSYASLSQGYKPGGYNLQPTSANDSRSYRPETSLNYEMGLKFNTPDQKVSARA 503 Y + P YA S+ P G L T+AN + T E+G+K +K Sbjct: 483 YNIEPDTALYAQYSEAADPVGGLLMITAANSK--FDLSTGKQIEVGVKQAFWGKKGEWTL 540 Query: 504 AVFQIESRNTQLYQGIVGSQYLTNAGQARSRGIEANLSAEVLRNWTLGLDAQVVDSIFTD 563 A + I+ +N L + GQ S G+E L+ W L +A ++ + F D Sbjct: 541 AAYNIK-KNNLLSRDTTNPALRIQVGQQSSTGLEGTLALAFAPGWQLDANAAILRAKFDD 599 Query: 564 YHVNS---STDYTGNKLPFVPRYILAASLSGRIATDVGMVRPRVAARYIGQQQFDAANSL 620 ++ + + +GN P V + LS D RY+G++ D AN+L Sbjct: 600 FNDSVGGVAVSRSGNVPPNVAERLANVWLSWNFVPDW---TASGGLRYVGKRYADNANTL 656 Query: 621 KQQGYMLVDGQVSWRATSKLDVSFYINNAFDKRYLNYAATSNGLRFGTLGEGREFGVKLR 680 Y D + W+A+ ++ N FDK+Y A S F G GR + Sbjct: 657 VMPAYTTTDLALQWKASRDTTLTLRGFNVFDKQYFTTAYYSGTQWFN--GPGRRIELTAN 714 Query: 681 YDF 683 Y F Sbjct: 715 YRF 717 >gi|152981136|ref|YP_001355272.1| outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Janthinobacterium sp. Marseille] Length = 717 Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 180/767 (23%), Positives = 288/767 (37%), Gaps = 134/767 (17%) Query: 1 MFQRKPICLALTGAMTLYSPLGVAQESASQGAA-------LPEVTVQA------------ 41 M RK I LA T A +PL +A + AA LPEV V A Sbjct: 1 MLHRKTIALAATLAWA--TPLSIAFAQQNDNAANPAVTTTLPEVKVTATDDASSELTHSY 58 Query: 42 --------SKQGKTEQKINGSISVVSGATLEQANVSRTDDLQRALPDLYLPQ-QGNSAFI 92 SK +T ++ SISVV+ ++ N+++ +D+ + + + + G F Sbjct: 59 AAHAVTVGSKIPQTLRETPQSISVVTRQRMDDQNITKIEDVLKQTTGVNVTRLDGAGNFN 118 Query: 93 TPSLRGVASLNTYNPAVVMYVDG--VPQFVTAQSQLLTNV-EQVELLRGPQGSLFGRNAA 149 + RG + T + +DG + Q + L T + +++E+LRGP G L G Sbjct: 119 SIQARGF-DIGT------IQLDGLAISQGANYSTALDTAIYDRIEVLRGPAGLLQGAGEP 171 Query: 150 AGVINIVTRQPDNELAGHVEGGFGNRGRRTTTASISGPLVK-DSLYGEAVIAYDSADGFL 208 G IN+V ++ + AG V G+ R ++G L + + V D + F+ Sbjct: 172 GGTINLVRKRARADFAGSVGVMLGSWDTRRAEFDLTGKLDEAGRIRARVVGLVDDRESFV 231 Query: 209 RSLSSGQDNVGMHEDVAGQVKLRYAPVGGPLDVRFMAS----HECVRSAEDNYVSYTNFS 264 +L S ++ L Y V L R S H+ V S D + Sbjct: 232 NTLQSKKN-------------LGYGTVEIDLTSRTTLSLGLAHQKVDSVVDQ--GLPALA 276 Query: 265 NRVILDGNSVPGLATMNSYMKRCIDNMSLSADYDFSDYRLSLVTARNKVD--IRERLLGA 322 N + + + + + N+ D+M ++ F D L AR ++D + + L A Sbjct: 277 NYTLPNVSRSTFIGSKNNVQDMQTDDMFAELEHKFDDGGLFKFAAR-QIDRSMIYKALRA 335 Query: 323 QGKSMPESQESLSQEVRLATRGT---------------GRAWDGVVGAYFEHGRYKQRSS 367 G + + + Q V T GR +VG K RS Sbjct: 336 NGLASVATGDVAYQTVNFQQEATNVNLDAYYAGPFQLGGRTHKVLVGVNRSTEESKNRSV 395 Query: 368 Y--------------VLFPTFGTDSSQTTTDSAAVFVDGTWHVTP--RWDVSAGARLVQD 411 + + +P + + + G + P RW G RL Sbjct: 396 FGPTGTMNIYHPNNDLPYPELNIGNYNNGSKQTQTGLYGQVQLKPLDRWTFLLGGRL--G 453 Query: 412 KAETSGVLPIEGVAAYASSTSSNKALGKLSTGYQLTP------SLRSYASLSQGYKPGGY 465 + ET P GV SSTS G Q TP +L +SL Y + Sbjct: 454 RWETESRNPTTGVV---SSTSR--------PGTQFTPLSSVIYTLSDNSSLYGSYAET-F 501 Query: 466 NLQPTSANDSRSYRPETSLNYEMGLKFNTPDQKVSARAAVFQIESRNTQLYQGIVGSQYL 525 Q + + P T E G+K D++V+ A+F+I ++ + + L Sbjct: 502 VGQTAIDRNGKLLDPRTGSQIEFGIKSEWFDKRVNTSFAIFRIIDKDRAIDD--TSTPSL 559 Query: 526 TNA---GQARSRGIEANLSAEVLRNWTLGLDAQVVDSIFTDYHVNSSTDYTGNKL-PFVP 581 T++ G+ RS+G+EA +S +V W L + F + S G PF P Sbjct: 560 TDSIPGGKVRSQGLEAEVSGQVAPGWELVAGYAYTATKFLQAPIAS----VGQAFSPFTP 615 Query: 582 R--YILAASLSGRIATDVGMVRPRVAARYIGQQQFDA---ANSLKQQGYMLVDGQVSWRA 636 R + L + S R D + R +A F + A + GY+ V GQV ++ Sbjct: 616 RHSFNLWSKHSWR---DGALNRWSLAGGLKAVSDFASGTGATRVVGDGYVTVSGQVGYQI 672 Query: 637 TSKLDVSFYINNAFDKRYLNYAATSNGLRFGTLGEGREFGVKLRYDF 683 S S + N FDK+Y Y SN R GE R + ++ F Sbjct: 673 DSTTTASLTVTNLFDKKY--YEKVSNFGRQNFYGEPRAVMLAVKKVF 717 >gi|152981258|ref|YP_001355221.1| outer membrane receptor [Janthinobacterium sp. Marseille] Length = 718 Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 155/684 (22%), Positives = 270/684 (39%), Gaps = 105/684 (15%) Query: 34 LPEVTVQASKQGKTEQKINGSISVVSGATLEQANVSRTDDLQRALPDLYL-PQQGNSAFI 92 L EV V AS + + SI++++ LE V+ + R + + + G + + Sbjct: 57 LAEVVVSASGFEQAIKDAPASITIITREQLETNRVNSVAEALRGVEGVDVGDAPGKTGGM 116 Query: 93 TPSLRGVASLNTY--------NPAVVMYVDGVPQFVTAQSQLLTNVEQVELLRGPQGSLF 144 S+RG+ S T N A + +G + T+ + +E++E++RGP +L+ Sbjct: 117 NISMRGMNSRFTLILIDGRRQNTAGSVTPNGFGETSTSFMPPPSAIERIEVIRGPMSTLY 176 Query: 145 GRNAAAGVINIVTRQPDNELAGHV--------EGGFGNRGRRTTTASISGPLVKDSLYGE 196 G +A GVINI+TR+ +G+V E FGN + + +SGPLV++ L+G Sbjct: 177 GSDAMGGVINIITRKVGKVWSGNVTAETTLQGESQFGN--SQAGSVYLSGPLVEN-LFGL 233 Query: 197 AVIA--YDSADGFLR-------SLSSGQDNVGMHEDVAGQVKLRYAPVGGPLDVRFMASH 247 V A Y D ++ SL+ G D V D AG KL + P Sbjct: 234 QVRARRYHRDDSNIQWPGKLPGSLTLGNDPVKSTIDTAG-AKLTFTP------------- 279 Query: 248 ECVRSAEDNYVSYTNFSNRVILDGNSVPGLATMNS------YM---KRCIDNMSLSADYD 298 +DN +S S+R D NS L T++ Y+ K D ++L+ Sbjct: 280 -----NKDNDISLDIDSSRQTYD-NSRGQLGTLDKTGAIRGYLPEQKFNRDQVTLAHTLR 333 Query: 299 FSDYRLSLVTARNKVDIRERLL--GAQGKSMPESQESLSQEVRLATRGTGRAWDG---VV 353 ++ L + K + R + GA G S +L E + A D V Sbjct: 334 MANSVLESSLSHTKTETIGRTIPDGAPGGKPAGSPRTLESESTIFDTKLVTALDTHMLSV 393 Query: 354 GAYFEHGRYKQRSSYVLFPTFGTDSSQTTTDSAAVFVDGTWHVTPRWDVSAGARLVQDKA 413 GA + ++ + + P G D Q VF + W + ++ G R D Sbjct: 394 GAQW----WEAKMIDAIAPR-GFDQKQI-----GVFAEDEWRIRKDLALTVGVR--HDNH 441 Query: 414 ETSGVLPIEGVAAYASSTSSNKALGKLSTGYQLTPSLRSYASLSQGYKPGGYNLQPTSAN 473 T G + ++T G +S Y+ TP L + G GG P N Sbjct: 442 STFGGATTPRMYLVWNATDQWTFKGGVSKAYR-TPGLEQLVNGLSGI--GGQGTIPLYGN 498 Query: 474 DSRSYRPETSLNYEMGLKFNTPDQKVSARAAVFQIESR-------NTQLYQGIVGSQYLT 526 + +PE S++ E+G F+ ++ A A +FQ + + N G + Sbjct: 499 P--ALQPERSVSSELGTYFDN-NKGFRANATIFQTDFKDAISTISNYVPPGGGAQGSFPV 555 Query: 527 NAGQARSRGIEANLSAEVLRNWTLGLDAQVVDSIFTDYHVNSSTDYTGNKLPFVPRYILA 586 N A +G+E S E R W + + +TD + + G L P++ Sbjct: 556 NVSNATVKGLELGGSLEFARVWRV-----AANYTYTDSEQKTGANI-GKPLENTPKHAAN 609 Query: 587 ASLSGRIATDVGMVRPRVAARYIGQQ---QFDAANSLKQ-----QGYMLVDGQVSWRATS 638 L R + + + A Y ++ + +A ++ K + Y L++ +++ Sbjct: 610 VKLDWRTSEQLNLW---AQAEYKSERYRPEDNATSNTKALLGDFKAYTLLNVGGTYKINK 666 Query: 639 KLDVSFYINNAFDKRYLNYAATSN 662 ++ +NN +K ++ Y N Sbjct: 667 SFAINMAVNNLLNKDFVAYRQVRN 690 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.315 0.131 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,501,457 Number of extensions: 60293 Number of successful extensions: 266 Number of sequences better than 1.0e-08: 12 Number of HSP's gapped: 259 Number of HSP's successfully gapped: 13 Length of query: 683 Length of database: 1,221,021 Length adjustment: 90 Effective length of query: 593 Effective length of database: 888,291 Effective search space: 526756563 Effective search space used: 526756563 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)